Gene : AT5G27238 A. thaliana TAIR10
Defline:  (1 of 25) PTHR31232//PTHR31232:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  2599
Name:  ? AT5G27238 Secondary Identifier:  ? PAC:19671951
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27238 0.5kb upstream 0.5kb upstream 1031 true Chr5: 9593904-9594934 Arabidopsis thaliana
AT5G27238 0.5kb upstream 0.5kb upstream 500 false Chr5: 9594435-9594934 Arabidopsis thaliana
AT5G27238 0.5kb downstream 0.5kb downstream 1031 true Chr5: 9593404-9594434 Arabidopsis thaliana
AT5G27238 0.5kb downstream 0.5kb downstream 500 false Chr5: 9593404-9593903 Arabidopsis thaliana
AT5G27238 1.0kb upstream 1.0kb upstream 1531 true Chr5: 9593904-9595434 Arabidopsis thaliana
AT5G27238 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9594435-9595434 Arabidopsis thaliana
AT5G27238 1.0kb downstream 1.0kb downstream 1531 true Chr5: 9592904-9594434 Arabidopsis thaliana
AT5G27238 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9592904-9593903 Arabidopsis thaliana
AT5G27238 2.0kb upstream 2.0kb upstream 2531 true Chr5: 9593904-9596434 Arabidopsis thaliana
AT5G27238 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9594435-9596434 Arabidopsis thaliana
AT5G27238 2.0kb downstream 2.0kb downstream 2531 true Chr5: 9591904-9594434 Arabidopsis thaliana
AT5G27238 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9591904-9593903 Arabidopsis thaliana
AT5G27238 5.0kb upstream 5.0kb upstream 5531 true Chr5: 9593904-9599434 Arabidopsis thaliana
AT5G27238 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9594435-9599434 Arabidopsis thaliana
AT5G27238 5.0kb downstream 5.0kb downstream 5531 true Chr5: 9588904-9594434 Arabidopsis thaliana
AT5G27238 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9588904-9593903 Arabidopsis thaliana
AT5G27238 10.0kb upstream 10.0kb upstream 10531 true Chr5: 9593904-9604434 Arabidopsis thaliana
AT5G27238 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9594435-9604434 Arabidopsis thaliana
AT5G27238 10.0kb downstream 10.0kb downstream 10531 true Chr5: 9583904-9594434 Arabidopsis thaliana
AT5G27238 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9583904-9593903 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382298 5261 Brassicaceae View MSA
123803812 5264 Brassicales-Malvales View MSA
124300881 5266 SBM View MSA
124253811 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain