Gene : AT5G26990 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31875//PTHR31875:SF0 - FAMILY NOT NAMED // PROTEIN DEHYDRATION-INDUCED 19-RELATED Genomic Order:  2578
Name:  ? AT5G26990 Secondary Identifier:  ? PAC:19668082
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26990 0.5kb upstream 0.5kb upstream 3349 true Chr5: 9490572-9493920 Arabidopsis thaliana
AT5G26990 0.5kb upstream 0.5kb upstream 500 false Chr5: 9490572-9491071 Arabidopsis thaliana
AT5G26990 0.5kb downstream 0.5kb downstream 3349 true Chr5: 9491072-9494420 Arabidopsis thaliana
AT5G26990 0.5kb downstream 0.5kb downstream 500 false Chr5: 9493921-9494420 Arabidopsis thaliana
AT5G26990 1.0kb upstream 1.0kb upstream 3849 true Chr5: 9490072-9493920 Arabidopsis thaliana
AT5G26990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9490072-9491071 Arabidopsis thaliana
AT5G26990 1.0kb downstream 1.0kb downstream 3849 true Chr5: 9491072-9494920 Arabidopsis thaliana
AT5G26990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9493921-9494920 Arabidopsis thaliana
AT5G26990 2.0kb upstream 2.0kb upstream 4849 true Chr5: 9489072-9493920 Arabidopsis thaliana
AT5G26990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9489072-9491071 Arabidopsis thaliana
AT5G26990 2.0kb downstream 2.0kb downstream 4849 true Chr5: 9491072-9495920 Arabidopsis thaliana
AT5G26990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9493921-9495920 Arabidopsis thaliana
AT5G26990 5.0kb upstream 5.0kb upstream 7849 true Chr5: 9486072-9493920 Arabidopsis thaliana
AT5G26990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9486072-9491071 Arabidopsis thaliana
AT5G26990 5.0kb downstream 5.0kb downstream 7849 true Chr5: 9491072-9498920 Arabidopsis thaliana
AT5G26990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9493921-9498920 Arabidopsis thaliana
AT5G26990 10.0kb upstream 10.0kb upstream 12849 true Chr5: 9481072-9493920 Arabidopsis thaliana
AT5G26990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9481072-9491071 Arabidopsis thaliana
AT5G26990 10.0kb downstream 10.0kb downstream 12849 true Chr5: 9491072-9503920 Arabidopsis thaliana
AT5G26990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9493921-9503920 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368652 5261 Brassicaceae View MSA
123840462 5264 Brassicales-Malvales View MSA
124351513 5266 SBM View MSA
124248070 5268 Malvidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.914        
cufflinks 7.679        
cufflinks 4.868       Low
cufflinks 7.3        
cufflinks 5.34       Low
cufflinks 8.18       High

0 Strain