Gene : AGL26 A. thaliana TAIR10
Primary Identifier:  ? AT5G26880 Defline:  (1 of 1) 2.1.1.207 - tRNA (cytidine(34)-2'-O)-methyltransferase / tRNA methyltransferase L
Genomic Order:  2566 Name:  ? AT5G26880
Secondary Identifier:  ? PAC:19668576
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26880 0.5kb upstream 0.5kb upstream 2694 true Chr5: 9457037-9459730 Arabidopsis thaliana
AT5G26880 0.5kb upstream 0.5kb upstream 500 false Chr5: 9459231-9459730 Arabidopsis thaliana
AT5G26880 0.5kb downstream 0.5kb downstream 2694 true Chr5: 9456537-9459230 Arabidopsis thaliana
AT5G26880 0.5kb downstream 0.5kb downstream 500 false Chr5: 9456537-9457036 Arabidopsis thaliana
AT5G26880 1.0kb upstream 1.0kb upstream 3194 true Chr5: 9457037-9460230 Arabidopsis thaliana
AT5G26880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9459231-9460230 Arabidopsis thaliana
AT5G26880 1.0kb downstream 1.0kb downstream 3194 true Chr5: 9456037-9459230 Arabidopsis thaliana
AT5G26880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9456037-9457036 Arabidopsis thaliana
AT5G26880 2.0kb upstream 2.0kb upstream 4194 true Chr5: 9457037-9461230 Arabidopsis thaliana
AT5G26880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9459231-9461230 Arabidopsis thaliana
AT5G26880 2.0kb downstream 2.0kb downstream 4194 true Chr5: 9455037-9459230 Arabidopsis thaliana
AT5G26880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9455037-9457036 Arabidopsis thaliana
AT5G26880 5.0kb upstream 5.0kb upstream 7194 true Chr5: 9457037-9464230 Arabidopsis thaliana
AT5G26880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9459231-9464230 Arabidopsis thaliana
AT5G26880 5.0kb downstream 5.0kb downstream 7194 true Chr5: 9452037-9459230 Arabidopsis thaliana
AT5G26880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9452037-9457036 Arabidopsis thaliana
AT5G26880 10.0kb upstream 10.0kb upstream 12194 true Chr5: 9457037-9469230 Arabidopsis thaliana
AT5G26880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9459231-9469230 Arabidopsis thaliana
AT5G26880 10.0kb downstream 10.0kb downstream 12194 true Chr5: 9447037-9459230 Arabidopsis thaliana
AT5G26880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9447037-9457036 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331140 5261 Brassicaceae Singleton cluster - no MSA
123772343 5264 Brassicales-Malvales Singleton cluster - no MSA
124270861 5266 SBM Singleton cluster - no MSA
124126911 5268 Malvidae Singleton cluster - no MSA
123855793 5270 Rosid Singleton cluster - no MSA
123441759 5271 Pentapetalae Singleton cluster - no MSA
122477342 5272 Eudicot Singleton cluster - no MSA
122045816 5273 Angiosperm View MSA
121345539 5274 Embryophyte View MSA
123426334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.144        
cufflinks 11.511        
cufflinks 14.257       High
cufflinks 10.74        
cufflinks 12.643        
cufflinks 9.591       Low

0 Strain