Gene : AT5G26710 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11451:SF37 - PROTEIN EARS-1 Genomic Order:  2536
Name:  ? AT5G26710 Secondary Identifier:  ? PAC:19670447
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5188 Arabidopsis thaliana pathologic  
Athaliana PWY-5918 Arabidopsis thaliana pathologic  
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26710 0.5kb upstream 0.5kb upstream 3428 true Chr5: 9305013-9308440 Arabidopsis thaliana
AT5G26710 0.5kb upstream 0.5kb upstream 500 false Chr5: 9305013-9305512 Arabidopsis thaliana
AT5G26710 0.5kb downstream 0.5kb downstream 3428 true Chr5: 9305513-9308940 Arabidopsis thaliana
AT5G26710 0.5kb downstream 0.5kb downstream 500 false Chr5: 9308441-9308940 Arabidopsis thaliana
AT5G26710 1.0kb upstream 1.0kb upstream 3928 true Chr5: 9304513-9308440 Arabidopsis thaliana
AT5G26710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9304513-9305512 Arabidopsis thaliana
AT5G26710 1.0kb downstream 1.0kb downstream 3928 true Chr5: 9305513-9309440 Arabidopsis thaliana
AT5G26710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9308441-9309440 Arabidopsis thaliana
AT5G26710 2.0kb upstream 2.0kb upstream 4928 true Chr5: 9303513-9308440 Arabidopsis thaliana
AT5G26710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9303513-9305512 Arabidopsis thaliana
AT5G26710 2.0kb downstream 2.0kb downstream 4928 true Chr5: 9305513-9310440 Arabidopsis thaliana
AT5G26710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9308441-9310440 Arabidopsis thaliana
AT5G26710 5.0kb upstream 5.0kb upstream 7928 true Chr5: 9300513-9308440 Arabidopsis thaliana
AT5G26710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9300513-9305512 Arabidopsis thaliana
AT5G26710 5.0kb downstream 5.0kb downstream 7928 true Chr5: 9305513-9313440 Arabidopsis thaliana
AT5G26710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9308441-9313440 Arabidopsis thaliana
AT5G26710 10.0kb upstream 10.0kb upstream 12928 true Chr5: 9295513-9308440 Arabidopsis thaliana
AT5G26710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9295513-9305512 Arabidopsis thaliana
AT5G26710 10.0kb downstream 10.0kb downstream 12928 true Chr5: 9305513-9318440 Arabidopsis thaliana
AT5G26710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9308441-9318440 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381575 5261 Brassicaceae View MSA
123835075 5264 Brassicales-Malvales View MSA
124339524 5266 SBM View MSA
124249324 5268 Malvidae View MSA
124065023 5270 Rosid View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.573        
cufflinks 40.193     High  
cufflinks 20.752        
cufflinks 42.157     High  
cufflinks 18.738       Low
cufflinks 49.697     High High

0 Strain