Gene : AT5G26680 A. thaliana TAIR10
Defline:  (1 of 1) K04799 - flap endonuclease-1 (FEN1, RAD2) Genomic Order:  2539
Name:  ? AT5G26680 Secondary Identifier:  ? PAC:19665503
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26680 0.5kb upstream 0.5kb upstream 4101 true Chr5: 9311875-9315975 Arabidopsis thaliana
AT5G26680 0.5kb upstream 0.5kb upstream 500 false Chr5: 9315476-9315975 Arabidopsis thaliana
AT5G26680 0.5kb downstream 0.5kb downstream 4101 true Chr5: 9311375-9315475 Arabidopsis thaliana
AT5G26680 0.5kb downstream 0.5kb downstream 500 false Chr5: 9311375-9311874 Arabidopsis thaliana
AT5G26680 1.0kb upstream 1.0kb upstream 4601 true Chr5: 9311875-9316475 Arabidopsis thaliana
AT5G26680 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9315476-9316475 Arabidopsis thaliana
AT5G26680 1.0kb downstream 1.0kb downstream 4601 true Chr5: 9310875-9315475 Arabidopsis thaliana
AT5G26680 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9310875-9311874 Arabidopsis thaliana
AT5G26680 2.0kb upstream 2.0kb upstream 5601 true Chr5: 9311875-9317475 Arabidopsis thaliana
AT5G26680 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9315476-9317475 Arabidopsis thaliana
AT5G26680 2.0kb downstream 2.0kb downstream 5601 true Chr5: 9309875-9315475 Arabidopsis thaliana
AT5G26680 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9309875-9311874 Arabidopsis thaliana
AT5G26680 5.0kb upstream 5.0kb upstream 8601 true Chr5: 9311875-9320475 Arabidopsis thaliana
AT5G26680 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9315476-9320475 Arabidopsis thaliana
AT5G26680 5.0kb downstream 5.0kb downstream 8601 true Chr5: 9306875-9315475 Arabidopsis thaliana
AT5G26680 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9306875-9311874 Arabidopsis thaliana
AT5G26680 10.0kb upstream 10.0kb upstream 13601 true Chr5: 9311875-9325475 Arabidopsis thaliana
AT5G26680 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9315476-9325475 Arabidopsis thaliana
AT5G26680 10.0kb downstream 10.0kb downstream 13601 true Chr5: 9301875-9315475 Arabidopsis thaliana
AT5G26680 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9301875-9311874 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330885 5261 Brassicaceae Singleton cluster - no MSA
123837116 5264 Brassicales-Malvales View MSA
124341356 5266 SBM View MSA
124241312 5268 Malvidae View MSA
124061895 5270 Rosid View MSA
123737846 5271 Pentapetalae View MSA
122788743 5272 Eudicot View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.239        
cufflinks 2.376        
cufflinks 1.027       Low
cufflinks 2.262        
cufflinks 0.994       Low
cufflinks 2.411        

0 Strain