Gene : AT5G26690 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22814//PTHR22814:SF5 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // F10A16.22 PROTEIN Genomic Order:  2538
Name:  ? AT5G26690 Secondary Identifier:  ? PAC:19668912
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26690 0.5kb upstream 0.5kb upstream 1276 true Chr5: 9310297-9311572 Arabidopsis thaliana
AT5G26690 0.5kb upstream 0.5kb upstream 500 false Chr5: 9310297-9310796 Arabidopsis thaliana
AT5G26690 0.5kb downstream 0.5kb downstream 1276 true Chr5: 9310797-9312072 Arabidopsis thaliana
AT5G26690 0.5kb downstream 0.5kb downstream 500 false Chr5: 9311573-9312072 Arabidopsis thaliana
AT5G26690 1.0kb upstream 1.0kb upstream 1776 true Chr5: 9309797-9311572 Arabidopsis thaliana
AT5G26690 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9309797-9310796 Arabidopsis thaliana
AT5G26690 1.0kb downstream 1.0kb downstream 1776 true Chr5: 9310797-9312572 Arabidopsis thaliana
AT5G26690 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9311573-9312572 Arabidopsis thaliana
AT5G26690 2.0kb upstream 2.0kb upstream 2776 true Chr5: 9308797-9311572 Arabidopsis thaliana
AT5G26690 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9308797-9310796 Arabidopsis thaliana
AT5G26690 2.0kb downstream 2.0kb downstream 2776 true Chr5: 9310797-9313572 Arabidopsis thaliana
AT5G26690 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9311573-9313572 Arabidopsis thaliana
AT5G26690 5.0kb upstream 5.0kb upstream 5776 true Chr5: 9305797-9311572 Arabidopsis thaliana
AT5G26690 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9305797-9310796 Arabidopsis thaliana
AT5G26690 5.0kb downstream 5.0kb downstream 5776 true Chr5: 9310797-9316572 Arabidopsis thaliana
AT5G26690 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9311573-9316572 Arabidopsis thaliana
AT5G26690 10.0kb upstream 10.0kb upstream 10776 true Chr5: 9300797-9311572 Arabidopsis thaliana
AT5G26690 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9300797-9310796 Arabidopsis thaliana
AT5G26690 10.0kb downstream 10.0kb downstream 10776 true Chr5: 9310797-9321572 Arabidopsis thaliana
AT5G26690 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9311573-9321572 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363392 5261 Brassicaceae View MSA
123798533 5264 Brassicales-Malvales View MSA
124350273 5266 SBM View MSA
124253793 5268 Malvidae View MSA
124070077 5270 Rosid View MSA
123749525 5271 Pentapetalae View MSA
122797492 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.562       High
cufflinks 0.525       Low
cufflinks 1.0        
cufflinks 3.492        
cufflinks 3.585        
cufflinks 2.686        

0 Strain