Gene : AT5G35960 A. thaliana TAIR10
Defline:  (1 of 1) PTHR27001:SF54 - RECEPTOR-LIKE CYTOPLASMIC KINASE VIA5 Genomic Order:  2909
Name:  ? AT5G35960 Secondary Identifier:  ? PAC:19667582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G35960 0.5kb upstream 0.5kb upstream 2513 true Chr5: 14108524-14111036 Arabidopsis thaliana
AT5G35960 0.5kb upstream 0.5kb upstream 500 false Chr5: 14110537-14111036 Arabidopsis thaliana
AT5G35960 0.5kb downstream 0.5kb downstream 2513 true Chr5: 14108024-14110536 Arabidopsis thaliana
AT5G35960 0.5kb downstream 0.5kb downstream 500 false Chr5: 14108024-14108523 Arabidopsis thaliana
AT5G35960 1.0kb upstream 1.0kb upstream 3013 true Chr5: 14108524-14111536 Arabidopsis thaliana
AT5G35960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14110537-14111536 Arabidopsis thaliana
AT5G35960 1.0kb downstream 1.0kb downstream 3013 true Chr5: 14107524-14110536 Arabidopsis thaliana
AT5G35960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14107524-14108523 Arabidopsis thaliana
AT5G35960 2.0kb upstream 2.0kb upstream 4013 true Chr5: 14108524-14112536 Arabidopsis thaliana
AT5G35960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14110537-14112536 Arabidopsis thaliana
AT5G35960 2.0kb downstream 2.0kb downstream 4013 true Chr5: 14106524-14110536 Arabidopsis thaliana
AT5G35960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14106524-14108523 Arabidopsis thaliana
AT5G35960 5.0kb upstream 5.0kb upstream 7013 true Chr5: 14108524-14115536 Arabidopsis thaliana
AT5G35960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14110537-14115536 Arabidopsis thaliana
AT5G35960 5.0kb downstream 5.0kb downstream 7013 true Chr5: 14103524-14110536 Arabidopsis thaliana
AT5G35960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14103524-14108523 Arabidopsis thaliana
AT5G35960 10.0kb upstream 10.0kb upstream 12013 true Chr5: 14108524-14120536 Arabidopsis thaliana
AT5G35960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14110537-14120536 Arabidopsis thaliana
AT5G35960 10.0kb downstream 10.0kb downstream 12013 true Chr5: 14098524-14110536 Arabidopsis thaliana
AT5G35960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14098524-14108523 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373952 5261 Brassicaceae View MSA
123841425 5264 Brassicales-Malvales View MSA
124350262 5266 SBM View MSA
124249949 5268 Malvidae View MSA
124069289 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.214     Low  
cufflinks 3.621        
cufflinks 0.15     Low  
cufflinks 4.231        
cufflinks 0.11     Low Low
cufflinks 5.632       High

0 Strain