Gene : AT5G35560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15288:SF4 - DENN (AEX-3) DOMAIN-CONTAINING PROTEIN Genomic Order:  2864
Name:  ? AT5G35560 Secondary Identifier:  ? PAC:19667663
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G35560 0.5kb upstream 0.5kb upstream 6704 true Chr5: 13742109-13748812 Arabidopsis thaliana
AT5G35560 0.5kb upstream 0.5kb upstream 500 false Chr5: 13748313-13748812 Arabidopsis thaliana
AT5G35560 0.5kb downstream 0.5kb downstream 6704 true Chr5: 13741609-13748312 Arabidopsis thaliana
AT5G35560 0.5kb downstream 0.5kb downstream 500 false Chr5: 13741609-13742108 Arabidopsis thaliana
AT5G35560 1.0kb upstream 1.0kb upstream 7204 true Chr5: 13742109-13749312 Arabidopsis thaliana
AT5G35560 1.0kb upstream 1.0kb upstream 1000 false Chr5: 13748313-13749312 Arabidopsis thaliana
AT5G35560 1.0kb downstream 1.0kb downstream 7204 true Chr5: 13741109-13748312 Arabidopsis thaliana
AT5G35560 1.0kb downstream 1.0kb downstream 1000 false Chr5: 13741109-13742108 Arabidopsis thaliana
AT5G35560 2.0kb upstream 2.0kb upstream 8204 true Chr5: 13742109-13750312 Arabidopsis thaliana
AT5G35560 2.0kb upstream 2.0kb upstream 2000 false Chr5: 13748313-13750312 Arabidopsis thaliana
AT5G35560 2.0kb downstream 2.0kb downstream 8204 true Chr5: 13740109-13748312 Arabidopsis thaliana
AT5G35560 2.0kb downstream 2.0kb downstream 2000 false Chr5: 13740109-13742108 Arabidopsis thaliana
AT5G35560 5.0kb upstream 5.0kb upstream 11204 true Chr5: 13742109-13753312 Arabidopsis thaliana
AT5G35560 5.0kb upstream 5.0kb upstream 5000 false Chr5: 13748313-13753312 Arabidopsis thaliana
AT5G35560 5.0kb downstream 5.0kb downstream 11204 true Chr5: 13737109-13748312 Arabidopsis thaliana
AT5G35560 5.0kb downstream 5.0kb downstream 5000 false Chr5: 13737109-13742108 Arabidopsis thaliana
AT5G35560 10.0kb upstream 10.0kb upstream 16204 true Chr5: 13742109-13758312 Arabidopsis thaliana
AT5G35560 10.0kb upstream 10.0kb upstream 10000 false Chr5: 13748313-13758312 Arabidopsis thaliana
AT5G35560 10.0kb downstream 10.0kb downstream 16204 true Chr5: 13732109-13748312 Arabidopsis thaliana
AT5G35560 10.0kb downstream 10.0kb downstream 10000 false Chr5: 13732109-13742108 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365679 5261 Brassicaceae View MSA
123833268 5264 Brassicales-Malvales View MSA
124337217 5266 SBM View MSA
124242587 5268 Malvidae View MSA
124069833 5270 Rosid View MSA
123750815 5271 Pentapetalae View MSA
122793034 5272 Eudicot View MSA
122046513 5273 Angiosperm View MSA
121343794 5274 Embryophyte View MSA
123425012 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.767       Low
cufflinks 8.102        
cufflinks 6.65       Low
cufflinks 8.515       High
cufflinks 7.904        
cufflinks 7.241        

0 Strain