Gene : AT5G35080 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15414 - OS-9-RELATED Genomic Order:  2823
Name:  ? AT5G35080 Secondary Identifier:  ? PAC:19666367
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G35080 0.5kb upstream 0.5kb upstream 3045 true Chr5: 13354273-13357317 Arabidopsis thaliana
AT5G35080 0.5kb upstream 0.5kb upstream 500 false Chr5: 13356818-13357317 Arabidopsis thaliana
AT5G35080 0.5kb downstream 0.5kb downstream 3045 true Chr5: 13353773-13356817 Arabidopsis thaliana
AT5G35080 0.5kb downstream 0.5kb downstream 500 false Chr5: 13353773-13354272 Arabidopsis thaliana
AT5G35080 1.0kb upstream 1.0kb upstream 3545 true Chr5: 13354273-13357817 Arabidopsis thaliana
AT5G35080 1.0kb upstream 1.0kb upstream 1000 false Chr5: 13356818-13357817 Arabidopsis thaliana
AT5G35080 1.0kb downstream 1.0kb downstream 3545 true Chr5: 13353273-13356817 Arabidopsis thaliana
AT5G35080 1.0kb downstream 1.0kb downstream 1000 false Chr5: 13353273-13354272 Arabidopsis thaliana
AT5G35080 2.0kb upstream 2.0kb upstream 4545 true Chr5: 13354273-13358817 Arabidopsis thaliana
AT5G35080 2.0kb upstream 2.0kb upstream 2000 false Chr5: 13356818-13358817 Arabidopsis thaliana
AT5G35080 2.0kb downstream 2.0kb downstream 4545 true Chr5: 13352273-13356817 Arabidopsis thaliana
AT5G35080 2.0kb downstream 2.0kb downstream 2000 false Chr5: 13352273-13354272 Arabidopsis thaliana
AT5G35080 5.0kb upstream 5.0kb upstream 7545 true Chr5: 13354273-13361817 Arabidopsis thaliana
AT5G35080 5.0kb upstream 5.0kb upstream 5000 false Chr5: 13356818-13361817 Arabidopsis thaliana
AT5G35080 5.0kb downstream 5.0kb downstream 7545 true Chr5: 13349273-13356817 Arabidopsis thaliana
AT5G35080 5.0kb downstream 5.0kb downstream 5000 false Chr5: 13349273-13354272 Arabidopsis thaliana
AT5G35080 10.0kb upstream 10.0kb upstream 12545 true Chr5: 13354273-13366817 Arabidopsis thaliana
AT5G35080 10.0kb upstream 10.0kb upstream 10000 false Chr5: 13356818-13366817 Arabidopsis thaliana
AT5G35080 10.0kb downstream 10.0kb downstream 12545 true Chr5: 13344273-13356817 Arabidopsis thaliana
AT5G35080 10.0kb downstream 10.0kb downstream 10000 false Chr5: 13344273-13354272 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026793 5273 Angiosperm View MSA
122378800 5261 Brassicaceae View MSA
123836983 5264 Brassicales-Malvales View MSA
124346953 5266 SBM View MSA
124245685 5268 Malvidae View MSA
124069455 5270 Rosid View MSA
123747319 5271 Pentapetalae View MSA
122794810 5272 Eudicot View MSA
121348244 5274 Embryophyte View MSA
123425730 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.752        
cufflinks 11.953        
cufflinks 6.171       Low
cufflinks 12.647        
cufflinks 7.114       Low
cufflinks 12.183        

0 Strain