Gene : AT5G33406 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32166:SF33 - HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEIN Genomic Order:  2799
Name:  ? AT5G33406 Secondary Identifier:  ? PAC:19669928
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G33406 0.5kb upstream 0.5kb upstream 2849 true Chr5: 12676055-12678903 Arabidopsis thaliana
AT5G33406 0.5kb upstream 0.5kb upstream 500 false Chr5: 12678404-12678903 Arabidopsis thaliana
AT5G33406 0.5kb downstream 0.5kb downstream 2849 true Chr5: 12675555-12678403 Arabidopsis thaliana
AT5G33406 0.5kb downstream 0.5kb downstream 500 false Chr5: 12675555-12676054 Arabidopsis thaliana
AT5G33406 1.0kb upstream 1.0kb upstream 3349 true Chr5: 12676055-12679403 Arabidopsis thaliana
AT5G33406 1.0kb upstream 1.0kb upstream 1000 false Chr5: 12678404-12679403 Arabidopsis thaliana
AT5G33406 1.0kb downstream 1.0kb downstream 3349 true Chr5: 12675055-12678403 Arabidopsis thaliana
AT5G33406 1.0kb downstream 1.0kb downstream 1000 false Chr5: 12675055-12676054 Arabidopsis thaliana
AT5G33406 2.0kb upstream 2.0kb upstream 4349 true Chr5: 12676055-12680403 Arabidopsis thaliana
AT5G33406 2.0kb upstream 2.0kb upstream 2000 false Chr5: 12678404-12680403 Arabidopsis thaliana
AT5G33406 2.0kb downstream 2.0kb downstream 4349 true Chr5: 12674055-12678403 Arabidopsis thaliana
AT5G33406 2.0kb downstream 2.0kb downstream 2000 false Chr5: 12674055-12676054 Arabidopsis thaliana
AT5G33406 5.0kb upstream 5.0kb upstream 7349 true Chr5: 12676055-12683403 Arabidopsis thaliana
AT5G33406 5.0kb upstream 5.0kb upstream 5000 false Chr5: 12678404-12683403 Arabidopsis thaliana
AT5G33406 5.0kb downstream 5.0kb downstream 7349 true Chr5: 12671055-12678403 Arabidopsis thaliana
AT5G33406 5.0kb downstream 5.0kb downstream 5000 false Chr5: 12671055-12676054 Arabidopsis thaliana
AT5G33406 10.0kb upstream 10.0kb upstream 12349 true Chr5: 12676055-12688403 Arabidopsis thaliana
AT5G33406 10.0kb upstream 10.0kb upstream 10000 false Chr5: 12678404-12688403 Arabidopsis thaliana
AT5G33406 10.0kb downstream 10.0kb downstream 12349 true Chr5: 12666055-12678403 Arabidopsis thaliana
AT5G33406 10.0kb downstream 10.0kb downstream 10000 false Chr5: 12666055-12676054 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331248 5261 Brassicaceae Singleton cluster - no MSA
123772448 5264 Brassicales-Malvales Singleton cluster - no MSA
124270962 5266 SBM Singleton cluster - no MSA
124127002 5268 Malvidae Singleton cluster - no MSA
123855880 5270 Rosid Singleton cluster - no MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain