Gene : AT5G30490 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23227 - BUCENTAUR RELATED Genomic Order:  2776
Name:  ? AT5G30490 Secondary Identifier:  ? PAC:19673098
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G30490 0.5kb upstream 0.5kb upstream 3048 true Chr5: 11611483-11614530 Arabidopsis thaliana
AT5G30490 0.5kb upstream 0.5kb upstream 500 false Chr5: 11611483-11611982 Arabidopsis thaliana
AT5G30490 0.5kb downstream 0.5kb downstream 3048 true Chr5: 11611983-11615030 Arabidopsis thaliana
AT5G30490 0.5kb downstream 0.5kb downstream 500 false Chr5: 11614531-11615030 Arabidopsis thaliana
AT5G30490 1.0kb upstream 1.0kb upstream 3548 true Chr5: 11610983-11614530 Arabidopsis thaliana
AT5G30490 1.0kb upstream 1.0kb upstream 1000 false Chr5: 11610983-11611982 Arabidopsis thaliana
AT5G30490 1.0kb downstream 1.0kb downstream 3548 true Chr5: 11611983-11615530 Arabidopsis thaliana
AT5G30490 1.0kb downstream 1.0kb downstream 1000 false Chr5: 11614531-11615530 Arabidopsis thaliana
AT5G30490 2.0kb upstream 2.0kb upstream 4548 true Chr5: 11609983-11614530 Arabidopsis thaliana
AT5G30490 2.0kb upstream 2.0kb upstream 2000 false Chr5: 11609983-11611982 Arabidopsis thaliana
AT5G30490 2.0kb downstream 2.0kb downstream 4548 true Chr5: 11611983-11616530 Arabidopsis thaliana
AT5G30490 2.0kb downstream 2.0kb downstream 2000 false Chr5: 11614531-11616530 Arabidopsis thaliana
AT5G30490 5.0kb upstream 5.0kb upstream 7548 true Chr5: 11606983-11614530 Arabidopsis thaliana
AT5G30490 5.0kb upstream 5.0kb upstream 5000 false Chr5: 11606983-11611982 Arabidopsis thaliana
AT5G30490 5.0kb downstream 5.0kb downstream 7548 true Chr5: 11611983-11619530 Arabidopsis thaliana
AT5G30490 5.0kb downstream 5.0kb downstream 5000 false Chr5: 11614531-11619530 Arabidopsis thaliana
AT5G30490 10.0kb upstream 10.0kb upstream 12548 true Chr5: 11601983-11614530 Arabidopsis thaliana
AT5G30490 10.0kb upstream 10.0kb upstream 10000 false Chr5: 11601983-11611982 Arabidopsis thaliana
AT5G30490 10.0kb downstream 10.0kb downstream 12548 true Chr5: 11611983-11624530 Arabidopsis thaliana
AT5G30490 10.0kb downstream 10.0kb downstream 10000 false Chr5: 11614531-11624530 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368127 5261 Brassicaceae View MSA
123836463 5264 Brassicales-Malvales View MSA
124338763 5266 SBM View MSA
124237930 5268 Malvidae View MSA
124061024 5270 Rosid View MSA
123752119 5271 Pentapetalae View MSA
122786900 5272 Eudicot View MSA
122044103 5273 Angiosperm View MSA
121343963 5274 Embryophyte View MSA
123425140 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.722        
cufflinks 3.448        
cufflinks 2.281       Low
cufflinks 3.361        
cufflinks 2.362       Low
cufflinks 3.666       High

0 Strain