Gene : RPS1 A. thaliana TAIR10
Primary Identifier:  ? AT5G30510 Defline:  (1 of 1) PTHR10724//PTHR10724:SF7 - S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1 // RIBOSOMAL PROTEIN S1-RELATED
Genomic Order:  2778 Name:  ? AT5G30510
Secondary Identifier:  ? PAC:19670906
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G30510 0.5kb upstream 0.5kb upstream 2773 true Chr5: 11619026-11621798 Arabidopsis thaliana
AT5G30510 0.5kb upstream 0.5kb upstream 500 false Chr5: 11621299-11621798 Arabidopsis thaliana
AT5G30510 0.5kb downstream 0.5kb downstream 2773 true Chr5: 11618526-11621298 Arabidopsis thaliana
AT5G30510 0.5kb downstream 0.5kb downstream 500 false Chr5: 11618526-11619025 Arabidopsis thaliana
AT5G30510 1.0kb upstream 1.0kb upstream 3273 true Chr5: 11619026-11622298 Arabidopsis thaliana
AT5G30510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 11621299-11622298 Arabidopsis thaliana
AT5G30510 1.0kb downstream 1.0kb downstream 3273 true Chr5: 11618026-11621298 Arabidopsis thaliana
AT5G30510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 11618026-11619025 Arabidopsis thaliana
AT5G30510 2.0kb upstream 2.0kb upstream 4273 true Chr5: 11619026-11623298 Arabidopsis thaliana
AT5G30510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 11621299-11623298 Arabidopsis thaliana
AT5G30510 2.0kb downstream 2.0kb downstream 4273 true Chr5: 11617026-11621298 Arabidopsis thaliana
AT5G30510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 11617026-11619025 Arabidopsis thaliana
AT5G30510 5.0kb upstream 5.0kb upstream 7273 true Chr5: 11619026-11626298 Arabidopsis thaliana
AT5G30510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 11621299-11626298 Arabidopsis thaliana
AT5G30510 5.0kb downstream 5.0kb downstream 7273 true Chr5: 11614026-11621298 Arabidopsis thaliana
AT5G30510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 11614026-11619025 Arabidopsis thaliana
AT5G30510 10.0kb upstream 10.0kb upstream 12273 true Chr5: 11619026-11631298 Arabidopsis thaliana
AT5G30510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 11621299-11631298 Arabidopsis thaliana
AT5G30510 10.0kb downstream 10.0kb downstream 12273 true Chr5: 11609026-11621298 Arabidopsis thaliana
AT5G30510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 11609026-11619025 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378144 5261 Brassicaceae View MSA
123830886 5264 Brassicales-Malvales View MSA
124337218 5266 SBM View MSA
124242595 5268 Malvidae View MSA
124061021 5270 Rosid View MSA
123748044 5271 Pentapetalae View MSA
122788997 5272 Eudicot View MSA
122042339 5273 Angiosperm View MSA
121347373 5274 Embryophyte View MSA
123425881 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 261.549     High  
cufflinks 15.498        
cufflinks 268.939     High  
cufflinks 16.355        
cufflinks 225.232     High  
cufflinks 17.906        

0 Strain