Gene : BIP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G28540 Defline:  (1 of 3) K09490 - heat shock 70kDa protein 5 (HSPA5, BIP)
Genomic Order:  2724 Name:  ? AT5G28540
Secondary Identifier:  ? PAC:19669624
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G28540 0.5kb upstream 0.5kb upstream 3416 true Chr5: 10540460-10543875 Arabidopsis thaliana
AT5G28540 0.5kb upstream 0.5kb upstream 500 false Chr5: 10543376-10543875 Arabidopsis thaliana
AT5G28540 0.5kb downstream 0.5kb downstream 3416 true Chr5: 10539960-10543375 Arabidopsis thaliana
AT5G28540 0.5kb downstream 0.5kb downstream 500 false Chr5: 10539960-10540459 Arabidopsis thaliana
AT5G28540 1.0kb upstream 1.0kb upstream 3916 true Chr5: 10540460-10544375 Arabidopsis thaliana
AT5G28540 1.0kb upstream 1.0kb upstream 1000 false Chr5: 10543376-10544375 Arabidopsis thaliana
AT5G28540 1.0kb downstream 1.0kb downstream 3916 true Chr5: 10539460-10543375 Arabidopsis thaliana
AT5G28540 1.0kb downstream 1.0kb downstream 1000 false Chr5: 10539460-10540459 Arabidopsis thaliana
AT5G28540 2.0kb upstream 2.0kb upstream 4916 true Chr5: 10540460-10545375 Arabidopsis thaliana
AT5G28540 2.0kb upstream 2.0kb upstream 2000 false Chr5: 10543376-10545375 Arabidopsis thaliana
AT5G28540 2.0kb downstream 2.0kb downstream 4916 true Chr5: 10538460-10543375 Arabidopsis thaliana
AT5G28540 2.0kb downstream 2.0kb downstream 2000 false Chr5: 10538460-10540459 Arabidopsis thaliana
AT5G28540 5.0kb upstream 5.0kb upstream 7916 true Chr5: 10540460-10548375 Arabidopsis thaliana
AT5G28540 5.0kb upstream 5.0kb upstream 5000 false Chr5: 10543376-10548375 Arabidopsis thaliana
AT5G28540 5.0kb downstream 5.0kb downstream 7916 true Chr5: 10535460-10543375 Arabidopsis thaliana
AT5G28540 5.0kb downstream 5.0kb downstream 5000 false Chr5: 10535460-10540459 Arabidopsis thaliana
AT5G28540 10.0kb upstream 10.0kb upstream 12916 true Chr5: 10540460-10553375 Arabidopsis thaliana
AT5G28540 10.0kb upstream 10.0kb upstream 10000 false Chr5: 10543376-10553375 Arabidopsis thaliana
AT5G28540 10.0kb downstream 10.0kb downstream 12916 true Chr5: 10530460-10543375 Arabidopsis thaliana
AT5G28540 10.0kb downstream 10.0kb downstream 10000 false Chr5: 10530460-10540459 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378579 5261 Brassicaceae View MSA
123838029 5264 Brassicales-Malvales View MSA
124347689 5266 SBM View MSA
124245601 5268 Malvidae View MSA
124071160 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 192.74     High High
cufflinks 91.565     High  
cufflinks 71.404     High Low
cufflinks 116.752     High  
cufflinks 87.757     High  
cufflinks 133.592     High  

0 Strain