Gene : NEK3 A. thaliana TAIR10
Primary Identifier:  ? AT5G28290 Defline:  (1 of 3) PTHR24362:SF255 - SERINE/THREONINE-PROTEIN KINASE NEK1
Genomic Order:  2699 Name:  ? AT5G28290
Secondary Identifier:  ? PAC:19670990
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G28290 0.5kb upstream 0.5kb upstream 4424 true Chr5: 10278691-10283114 Arabidopsis thaliana
AT5G28290 0.5kb upstream 0.5kb upstream 500 false Chr5: 10282615-10283114 Arabidopsis thaliana
AT5G28290 0.5kb downstream 0.5kb downstream 4424 true Chr5: 10278191-10282614 Arabidopsis thaliana
AT5G28290 0.5kb downstream 0.5kb downstream 500 false Chr5: 10278191-10278690 Arabidopsis thaliana
AT5G28290 1.0kb upstream 1.0kb upstream 4924 true Chr5: 10278691-10283614 Arabidopsis thaliana
AT5G28290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 10282615-10283614 Arabidopsis thaliana
AT5G28290 1.0kb downstream 1.0kb downstream 4924 true Chr5: 10277691-10282614 Arabidopsis thaliana
AT5G28290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 10277691-10278690 Arabidopsis thaliana
AT5G28290 2.0kb upstream 2.0kb upstream 5924 true Chr5: 10278691-10284614 Arabidopsis thaliana
AT5G28290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 10282615-10284614 Arabidopsis thaliana
AT5G28290 2.0kb downstream 2.0kb downstream 5924 true Chr5: 10276691-10282614 Arabidopsis thaliana
AT5G28290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 10276691-10278690 Arabidopsis thaliana
AT5G28290 5.0kb upstream 5.0kb upstream 8924 true Chr5: 10278691-10287614 Arabidopsis thaliana
AT5G28290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 10282615-10287614 Arabidopsis thaliana
AT5G28290 5.0kb downstream 5.0kb downstream 8924 true Chr5: 10273691-10282614 Arabidopsis thaliana
AT5G28290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 10273691-10278690 Arabidopsis thaliana
AT5G28290 10.0kb upstream 10.0kb upstream 13924 true Chr5: 10278691-10292614 Arabidopsis thaliana
AT5G28290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 10282615-10292614 Arabidopsis thaliana
AT5G28290 10.0kb downstream 10.0kb downstream 13924 true Chr5: 10268691-10282614 Arabidopsis thaliana
AT5G28290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 10268691-10278690 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366230 5261 Brassicaceae View MSA
123799134 5264 Brassicales-Malvales View MSA
124296684 5266 SBM View MSA
124148764 5268 Malvidae View MSA
123874700 5270 Rosid View MSA
123743821 5271 Pentapetalae View MSA
122789481 5272 Eudicot View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.906        
cufflinks 6.86        
cufflinks 3.304        
cufflinks 5.907        
cufflinks 2.208       Low
cufflinks 7.179        

0 Strain