Gene : AT5G38350 A. thaliana TAIR10
Defline:  (1 of 2) PF00931//PF07725 - NB-ARC domain (NB-ARC) // Leucine Rich Repeat (LRR_3) Genomic Order:  3133
Name:  ? AT5G38350 Secondary Identifier:  ? PAC:19671332
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G38350 0.5kb upstream 0.5kb upstream 3370 true Chr5: 15328159-15331528 Arabidopsis thaliana
AT5G38350 0.5kb upstream 0.5kb upstream 500 false Chr5: 15328159-15328658 Arabidopsis thaliana
AT5G38350 0.5kb downstream 0.5kb downstream 3370 true Chr5: 15328659-15332028 Arabidopsis thaliana
AT5G38350 0.5kb downstream 0.5kb downstream 500 false Chr5: 15331529-15332028 Arabidopsis thaliana
AT5G38350 1.0kb upstream 1.0kb upstream 3870 true Chr5: 15327659-15331528 Arabidopsis thaliana
AT5G38350 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15327659-15328658 Arabidopsis thaliana
AT5G38350 1.0kb downstream 1.0kb downstream 3870 true Chr5: 15328659-15332528 Arabidopsis thaliana
AT5G38350 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15331529-15332528 Arabidopsis thaliana
AT5G38350 2.0kb upstream 2.0kb upstream 4870 true Chr5: 15326659-15331528 Arabidopsis thaliana
AT5G38350 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15326659-15328658 Arabidopsis thaliana
AT5G38350 2.0kb downstream 2.0kb downstream 4870 true Chr5: 15328659-15333528 Arabidopsis thaliana
AT5G38350 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15331529-15333528 Arabidopsis thaliana
AT5G38350 5.0kb upstream 5.0kb upstream 7870 true Chr5: 15323659-15331528 Arabidopsis thaliana
AT5G38350 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15323659-15328658 Arabidopsis thaliana
AT5G38350 5.0kb downstream 5.0kb downstream 7870 true Chr5: 15328659-15336528 Arabidopsis thaliana
AT5G38350 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15331529-15336528 Arabidopsis thaliana
AT5G38350 10.0kb upstream 10.0kb upstream 12870 true Chr5: 15318659-15331528 Arabidopsis thaliana
AT5G38350 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15318659-15328658 Arabidopsis thaliana
AT5G38350 10.0kb downstream 10.0kb downstream 12870 true Chr5: 15328659-15341528 Arabidopsis thaliana
AT5G38350 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15331529-15341528 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495858 5273 Angiosperm View MSA
122332159 5261 Brassicaceae View MSA
123773260 5264 Brassicales-Malvales View MSA
124271752 5266 SBM View MSA
124127711 5268 Malvidae View MSA
123856532 5270 Rosid View MSA
123442449 5271 Pentapetalae View MSA
122478026 5272 Eudicot View MSA
120769219 5274 Embryophyte View MSA
122811588 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.344        
cufflinks 7.524        
cufflinks 0.018     Low Low
cufflinks 8.132        
cufflinks 0.054     Low  
cufflinks 6.537        

0 Strain