Gene : AT5G38050 A. thaliana TAIR10
Defline:  (1 of 2) K15186 - ELL-associated factor (EAF) Genomic Order:  3099
Name:  ? AT5G38050 Secondary Identifier:  ? PAC:19667219
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G38050 0.5kb upstream 0.5kb upstream 1765 true Chr5: 15187019-15188783 Arabidopsis thaliana
AT5G38050 0.5kb upstream 0.5kb upstream 500 false Chr5: 15187019-15187518 Arabidopsis thaliana
AT5G38050 0.5kb downstream 0.5kb downstream 1765 true Chr5: 15187519-15189283 Arabidopsis thaliana
AT5G38050 0.5kb downstream 0.5kb downstream 500 false Chr5: 15188784-15189283 Arabidopsis thaliana
AT5G38050 1.0kb upstream 1.0kb upstream 2265 true Chr5: 15186519-15188783 Arabidopsis thaliana
AT5G38050 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15186519-15187518 Arabidopsis thaliana
AT5G38050 1.0kb downstream 1.0kb downstream 2265 true Chr5: 15187519-15189783 Arabidopsis thaliana
AT5G38050 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15188784-15189783 Arabidopsis thaliana
AT5G38050 2.0kb upstream 2.0kb upstream 3265 true Chr5: 15185519-15188783 Arabidopsis thaliana
AT5G38050 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15185519-15187518 Arabidopsis thaliana
AT5G38050 2.0kb downstream 2.0kb downstream 3265 true Chr5: 15187519-15190783 Arabidopsis thaliana
AT5G38050 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15188784-15190783 Arabidopsis thaliana
AT5G38050 5.0kb upstream 5.0kb upstream 6265 true Chr5: 15182519-15188783 Arabidopsis thaliana
AT5G38050 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15182519-15187518 Arabidopsis thaliana
AT5G38050 5.0kb downstream 5.0kb downstream 6265 true Chr5: 15187519-15193783 Arabidopsis thaliana
AT5G38050 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15188784-15193783 Arabidopsis thaliana
AT5G38050 10.0kb upstream 10.0kb upstream 11265 true Chr5: 15177519-15188783 Arabidopsis thaliana
AT5G38050 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15177519-15187518 Arabidopsis thaliana
AT5G38050 10.0kb downstream 10.0kb downstream 11265 true Chr5: 15187519-15198783 Arabidopsis thaliana
AT5G38050 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15188784-15198783 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379409 5261 Brassicaceae View MSA
123838905 5264 Brassicales-Malvales View MSA
124347123 5266 SBM View MSA
124245321 5268 Malvidae View MSA
124060442 5270 Rosid View MSA
123736419 5271 Pentapetalae View MSA
122791922 5272 Eudicot View MSA
122044960 5273 Angiosperm View MSA
121347261 5274 Embryophyte View MSA
123428623 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96        
cufflinks 3.835        
cufflinks 2.781        
cufflinks 4.173       High
cufflinks 2.459       Low
cufflinks 3.005        

0 Strain