Gene : AT5G37475 A. thaliana TAIR10
Defline:  (1 of 2) K03245 - translation initiation factor 3 subunit J (EIF3J) Genomic Order:  3040
Name:  ? AT5G37475 Secondary Identifier:  ? PAC:19666490
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G37475 0.5kb upstream 0.5kb upstream 3185 true Chr5: 14866057-14869241 Arabidopsis thaliana
AT5G37475 0.5kb upstream 0.5kb upstream 500 false Chr5: 14868742-14869241 Arabidopsis thaliana
AT5G37475 0.5kb downstream 0.5kb downstream 3185 true Chr5: 14865557-14868741 Arabidopsis thaliana
AT5G37475 0.5kb downstream 0.5kb downstream 500 false Chr5: 14865557-14866056 Arabidopsis thaliana
AT5G37475 1.0kb upstream 1.0kb upstream 3685 true Chr5: 14866057-14869741 Arabidopsis thaliana
AT5G37475 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14868742-14869741 Arabidopsis thaliana
AT5G37475 1.0kb downstream 1.0kb downstream 3685 true Chr5: 14865057-14868741 Arabidopsis thaliana
AT5G37475 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14865057-14866056 Arabidopsis thaliana
AT5G37475 2.0kb upstream 2.0kb upstream 4685 true Chr5: 14866057-14870741 Arabidopsis thaliana
AT5G37475 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14868742-14870741 Arabidopsis thaliana
AT5G37475 2.0kb downstream 2.0kb downstream 4685 true Chr5: 14864057-14868741 Arabidopsis thaliana
AT5G37475 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14864057-14866056 Arabidopsis thaliana
AT5G37475 5.0kb upstream 5.0kb upstream 7685 true Chr5: 14866057-14873741 Arabidopsis thaliana
AT5G37475 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14868742-14873741 Arabidopsis thaliana
AT5G37475 5.0kb downstream 5.0kb downstream 7685 true Chr5: 14861057-14868741 Arabidopsis thaliana
AT5G37475 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14861057-14866056 Arabidopsis thaliana
AT5G37475 10.0kb upstream 10.0kb upstream 12685 true Chr5: 14866057-14878741 Arabidopsis thaliana
AT5G37475 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14868742-14878741 Arabidopsis thaliana
AT5G37475 10.0kb downstream 10.0kb downstream 12685 true Chr5: 14856057-14868741 Arabidopsis thaliana
AT5G37475 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14856057-14866056 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367826 5261 Brassicaceae View MSA
123838907 5264 Brassicales-Malvales View MSA
124336772 5266 SBM View MSA
124250510 5268 Malvidae View MSA
124062872 5270 Rosid View MSA
123745342 5271 Pentapetalae View MSA
122795526 5272 Eudicot View MSA
122043857 5273 Angiosperm View MSA
121344885 5274 Embryophyte View MSA
123424883 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.991        
cufflinks 19.166       High
cufflinks 10.423        
cufflinks 16.944        
cufflinks 8.872       Low
cufflinks 16.55        

0 Strain