Gene : AT5G37380 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24078//PTHR24078:SF208 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  3030
Name:  ? AT5G37380 Secondary Identifier:  ? PAC:19667349
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G37380 0.5kb upstream 0.5kb upstream 3038 true Chr5: 14816759-14819796 Arabidopsis thaliana
AT5G37380 0.5kb upstream 0.5kb upstream 500 false Chr5: 14819297-14819796 Arabidopsis thaliana
AT5G37380 0.5kb downstream 0.5kb downstream 3038 true Chr5: 14816259-14819296 Arabidopsis thaliana
AT5G37380 0.5kb downstream 0.5kb downstream 500 false Chr5: 14816259-14816758 Arabidopsis thaliana
AT5G37380 1.0kb upstream 1.0kb upstream 3538 true Chr5: 14816759-14820296 Arabidopsis thaliana
AT5G37380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14819297-14820296 Arabidopsis thaliana
AT5G37380 1.0kb downstream 1.0kb downstream 3538 true Chr5: 14815759-14819296 Arabidopsis thaliana
AT5G37380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14815759-14816758 Arabidopsis thaliana
AT5G37380 2.0kb upstream 2.0kb upstream 4538 true Chr5: 14816759-14821296 Arabidopsis thaliana
AT5G37380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14819297-14821296 Arabidopsis thaliana
AT5G37380 2.0kb downstream 2.0kb downstream 4538 true Chr5: 14814759-14819296 Arabidopsis thaliana
AT5G37380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14814759-14816758 Arabidopsis thaliana
AT5G37380 5.0kb upstream 5.0kb upstream 7538 true Chr5: 14816759-14824296 Arabidopsis thaliana
AT5G37380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14819297-14824296 Arabidopsis thaliana
AT5G37380 5.0kb downstream 5.0kb downstream 7538 true Chr5: 14811759-14819296 Arabidopsis thaliana
AT5G37380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14811759-14816758 Arabidopsis thaliana
AT5G37380 10.0kb upstream 10.0kb upstream 12538 true Chr5: 14816759-14829296 Arabidopsis thaliana
AT5G37380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14819297-14829296 Arabidopsis thaliana
AT5G37380 10.0kb downstream 10.0kb downstream 12538 true Chr5: 14806759-14819296 Arabidopsis thaliana
AT5G37380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14806759-14816758 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367874 5261 Brassicaceae View MSA
123799437 5264 Brassicales-Malvales View MSA
124296958 5266 SBM View MSA
124253340 5268 Malvidae View MSA
124073950 5270 Rosid View MSA
123751687 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.421        
cufflinks 1.464        
cufflinks 1.214       Low
cufflinks 1.568       High
cufflinks 1.308        
cufflinks 1.35        

0 Strain