Gene : AT5G37310 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10766//PTHR10766:SF58 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3023
Name:  ? AT5G37310 Secondary Identifier:  ? PAC:19668336
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G37310 0.5kb upstream 0.5kb upstream 4196 true Chr5: 14772512-14776707 Arabidopsis thaliana
AT5G37310 0.5kb upstream 0.5kb upstream 500 false Chr5: 14776208-14776707 Arabidopsis thaliana
AT5G37310 0.5kb downstream 0.5kb downstream 4196 true Chr5: 14772012-14776207 Arabidopsis thaliana
AT5G37310 0.5kb downstream 0.5kb downstream 500 false Chr5: 14772012-14772511 Arabidopsis thaliana
AT5G37310 1.0kb upstream 1.0kb upstream 4696 true Chr5: 14772512-14777207 Arabidopsis thaliana
AT5G37310 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14776208-14777207 Arabidopsis thaliana
AT5G37310 1.0kb downstream 1.0kb downstream 4696 true Chr5: 14771512-14776207 Arabidopsis thaliana
AT5G37310 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14771512-14772511 Arabidopsis thaliana
AT5G37310 2.0kb upstream 2.0kb upstream 5696 true Chr5: 14772512-14778207 Arabidopsis thaliana
AT5G37310 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14776208-14778207 Arabidopsis thaliana
AT5G37310 2.0kb downstream 2.0kb downstream 5696 true Chr5: 14770512-14776207 Arabidopsis thaliana
AT5G37310 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14770512-14772511 Arabidopsis thaliana
AT5G37310 5.0kb upstream 5.0kb upstream 8696 true Chr5: 14772512-14781207 Arabidopsis thaliana
AT5G37310 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14776208-14781207 Arabidopsis thaliana
AT5G37310 5.0kb downstream 5.0kb downstream 8696 true Chr5: 14767512-14776207 Arabidopsis thaliana
AT5G37310 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14767512-14772511 Arabidopsis thaliana
AT5G37310 10.0kb upstream 10.0kb upstream 13696 true Chr5: 14772512-14786207 Arabidopsis thaliana
AT5G37310 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14776208-14786207 Arabidopsis thaliana
AT5G37310 10.0kb downstream 10.0kb downstream 13696 true Chr5: 14762512-14776207 Arabidopsis thaliana
AT5G37310 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14762512-14772511 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376695 5261 Brassicaceae View MSA
123835811 5264 Brassicales-Malvales View MSA
124322091 5266 SBM View MSA
124253929 5268 Malvidae View MSA
124069153 5270 Rosid View MSA
123738097 5271 Pentapetalae View MSA
122788164 5272 Eudicot View MSA
122049966 5273 Angiosperm View MSA
121347784 5274 Embryophyte View MSA
123425763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.218        
cufflinks 20.863        
cufflinks 12.383        
cufflinks 20.35        
cufflinks 10.394       Low
cufflinks 25.028       High

0 Strain