Gene : AT5G36290 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Genomic Order:  2935
Name:  ? AT5G36290 Secondary Identifier:  ? PAC:19669445
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G36290 0.5kb upstream 0.5kb upstream 2938 true Chr5: 14302239-14305176 Arabidopsis thaliana
AT5G36290 0.5kb upstream 0.5kb upstream 500 false Chr5: 14302239-14302738 Arabidopsis thaliana
AT5G36290 0.5kb downstream 0.5kb downstream 2938 true Chr5: 14302739-14305676 Arabidopsis thaliana
AT5G36290 0.5kb downstream 0.5kb downstream 500 false Chr5: 14305177-14305676 Arabidopsis thaliana
AT5G36290 1.0kb upstream 1.0kb upstream 3438 true Chr5: 14301739-14305176 Arabidopsis thaliana
AT5G36290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14301739-14302738 Arabidopsis thaliana
AT5G36290 1.0kb downstream 1.0kb downstream 3438 true Chr5: 14302739-14306176 Arabidopsis thaliana
AT5G36290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14305177-14306176 Arabidopsis thaliana
AT5G36290 2.0kb upstream 2.0kb upstream 4438 true Chr5: 14300739-14305176 Arabidopsis thaliana
AT5G36290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14300739-14302738 Arabidopsis thaliana
AT5G36290 2.0kb downstream 2.0kb downstream 4438 true Chr5: 14302739-14307176 Arabidopsis thaliana
AT5G36290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14305177-14307176 Arabidopsis thaliana
AT5G36290 5.0kb upstream 5.0kb upstream 7438 true Chr5: 14297739-14305176 Arabidopsis thaliana
AT5G36290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14297739-14302738 Arabidopsis thaliana
AT5G36290 5.0kb downstream 5.0kb downstream 7438 true Chr5: 14302739-14310176 Arabidopsis thaliana
AT5G36290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14305177-14310176 Arabidopsis thaliana
AT5G36290 10.0kb upstream 10.0kb upstream 12438 true Chr5: 14292739-14305176 Arabidopsis thaliana
AT5G36290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14292739-14302738 Arabidopsis thaliana
AT5G36290 10.0kb downstream 10.0kb downstream 12438 true Chr5: 14302739-14315176 Arabidopsis thaliana
AT5G36290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14305177-14315176 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369766 5261 Brassicaceae View MSA
123829657 5264 Brassicales-Malvales View MSA
124337727 5266 SBM View MSA
124248081 5268 Malvidae View MSA
124066638 5270 Rosid View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.302        
cufflinks 26.499        
cufflinks 8.724       Low
cufflinks 22.574        
cufflinks 9.4       Low
cufflinks 28.791       High

0 Strain