Gene : scpl1 A. thaliana TAIR10
Primary Identifier:  ? AT5G36180 Defline:  (1 of 16) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase
Genomic Order:  2924 Name:  ? AT5G36180
Secondary Identifier:  ? PAC:19670816
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G36180 0.5kb upstream 0.5kb upstream 3608 true Chr5: 14238528-14242135 Arabidopsis thaliana
AT5G36180 0.5kb upstream 0.5kb upstream 500 false Chr5: 14238528-14239027 Arabidopsis thaliana
AT5G36180 0.5kb downstream 0.5kb downstream 3608 true Chr5: 14239028-14242635 Arabidopsis thaliana
AT5G36180 0.5kb downstream 0.5kb downstream 500 false Chr5: 14242136-14242635 Arabidopsis thaliana
AT5G36180 1.0kb upstream 1.0kb upstream 4108 true Chr5: 14238028-14242135 Arabidopsis thaliana
AT5G36180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14238028-14239027 Arabidopsis thaliana
AT5G36180 1.0kb downstream 1.0kb downstream 4108 true Chr5: 14239028-14243135 Arabidopsis thaliana
AT5G36180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14242136-14243135 Arabidopsis thaliana
AT5G36180 2.0kb upstream 2.0kb upstream 5108 true Chr5: 14237028-14242135 Arabidopsis thaliana
AT5G36180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14237028-14239027 Arabidopsis thaliana
AT5G36180 2.0kb downstream 2.0kb downstream 5108 true Chr5: 14239028-14244135 Arabidopsis thaliana
AT5G36180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14242136-14244135 Arabidopsis thaliana
AT5G36180 5.0kb upstream 5.0kb upstream 8108 true Chr5: 14234028-14242135 Arabidopsis thaliana
AT5G36180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14234028-14239027 Arabidopsis thaliana
AT5G36180 5.0kb downstream 5.0kb downstream 8108 true Chr5: 14239028-14247135 Arabidopsis thaliana
AT5G36180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14242136-14247135 Arabidopsis thaliana
AT5G36180 10.0kb upstream 10.0kb upstream 13108 true Chr5: 14229028-14242135 Arabidopsis thaliana
AT5G36180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14229028-14239027 Arabidopsis thaliana
AT5G36180 10.0kb downstream 10.0kb downstream 13108 true Chr5: 14239028-14252135 Arabidopsis thaliana
AT5G36180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14242136-14252135 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378201 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 1.755        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.861        
cufflinks 0.016     Low Low
cufflinks 3.938        

0 Strain