Gene : PEN3 A. thaliana TAIR10
Primary Identifier:  ? AT5G36150 Defline:  (1 of 1) K16205 - tirucalladienol synthase (PEN3)
Genomic Order:  2921 Name:  ? AT5G36150
Secondary Identifier:  ? PAC:19671661
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G36150 0.5kb upstream 0.5kb upstream 5186 true Chr5: 14220737-14225922 Arabidopsis thaliana
AT5G36150 0.5kb upstream 0.5kb upstream 500 false Chr5: 14225423-14225922 Arabidopsis thaliana
AT5G36150 0.5kb downstream 0.5kb downstream 5186 true Chr5: 14220237-14225422 Arabidopsis thaliana
AT5G36150 0.5kb downstream 0.5kb downstream 500 false Chr5: 14220237-14220736 Arabidopsis thaliana
AT5G36150 1.0kb upstream 1.0kb upstream 5686 true Chr5: 14220737-14226422 Arabidopsis thaliana
AT5G36150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14225423-14226422 Arabidopsis thaliana
AT5G36150 1.0kb downstream 1.0kb downstream 5686 true Chr5: 14219737-14225422 Arabidopsis thaliana
AT5G36150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14219737-14220736 Arabidopsis thaliana
AT5G36150 2.0kb upstream 2.0kb upstream 6686 true Chr5: 14220737-14227422 Arabidopsis thaliana
AT5G36150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14225423-14227422 Arabidopsis thaliana
AT5G36150 2.0kb downstream 2.0kb downstream 6686 true Chr5: 14218737-14225422 Arabidopsis thaliana
AT5G36150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14218737-14220736 Arabidopsis thaliana
AT5G36150 5.0kb upstream 5.0kb upstream 9686 true Chr5: 14220737-14230422 Arabidopsis thaliana
AT5G36150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14225423-14230422 Arabidopsis thaliana
AT5G36150 5.0kb downstream 5.0kb downstream 9686 true Chr5: 14215737-14225422 Arabidopsis thaliana
AT5G36150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14215737-14220736 Arabidopsis thaliana
AT5G36150 10.0kb upstream 10.0kb upstream 14686 true Chr5: 14220737-14235422 Arabidopsis thaliana
AT5G36150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14225423-14235422 Arabidopsis thaliana
AT5G36150 10.0kb downstream 10.0kb downstream 14686 true Chr5: 14210737-14225422 Arabidopsis thaliana
AT5G36150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14210737-14220736 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122378105 5261 Brassicaceae View MSA
123841722 5264 Brassicales-Malvales View MSA
124351667 5266 SBM View MSA
124245550 5268 Malvidae View MSA
124052067 5270 Rosid View MSA
123750414 5271 Pentapetalae View MSA
122773643 5272 Eudicot View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.986        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.749       High
cufflinks 0.005     Low Low
cufflinks 0.165     Low  

0 Strain