Gene : CCB3 A. thaliana TAIR10
Primary Identifier:  ? AT5G36120 Defline:  (1 of 1) PTHR33219//PTHR33219:SF1 - FAMILY NOT NAMED // COFACTOR ASSEMBLY, COMPLEX C (B6F)
Genomic Order:  2918 Name:  ? AT5G36120
Secondary Identifier:  ? PAC:19668778
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G36120 0.5kb upstream 0.5kb upstream 1157 true Chr5: 14198587-14199743 Arabidopsis thaliana
AT5G36120 0.5kb upstream 0.5kb upstream 500 false Chr5: 14199244-14199743 Arabidopsis thaliana
AT5G36120 0.5kb downstream 0.5kb downstream 1157 true Chr5: 14198087-14199243 Arabidopsis thaliana
AT5G36120 0.5kb downstream 0.5kb downstream 500 false Chr5: 14198087-14198586 Arabidopsis thaliana
AT5G36120 1.0kb upstream 1.0kb upstream 1657 true Chr5: 14198587-14200243 Arabidopsis thaliana
AT5G36120 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14199244-14200243 Arabidopsis thaliana
AT5G36120 1.0kb downstream 1.0kb downstream 1657 true Chr5: 14197587-14199243 Arabidopsis thaliana
AT5G36120 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14197587-14198586 Arabidopsis thaliana
AT5G36120 2.0kb upstream 2.0kb upstream 2657 true Chr5: 14198587-14201243 Arabidopsis thaliana
AT5G36120 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14199244-14201243 Arabidopsis thaliana
AT5G36120 2.0kb downstream 2.0kb downstream 2657 true Chr5: 14196587-14199243 Arabidopsis thaliana
AT5G36120 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14196587-14198586 Arabidopsis thaliana
AT5G36120 5.0kb upstream 5.0kb upstream 5657 true Chr5: 14198587-14204243 Arabidopsis thaliana
AT5G36120 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14199244-14204243 Arabidopsis thaliana
AT5G36120 5.0kb downstream 5.0kb downstream 5657 true Chr5: 14193587-14199243 Arabidopsis thaliana
AT5G36120 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14193587-14198586 Arabidopsis thaliana
AT5G36120 10.0kb upstream 10.0kb upstream 10657 true Chr5: 14198587-14209243 Arabidopsis thaliana
AT5G36120 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14199244-14209243 Arabidopsis thaliana
AT5G36120 10.0kb downstream 10.0kb downstream 10657 true Chr5: 14188587-14199243 Arabidopsis thaliana
AT5G36120 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14188587-14198586 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364764 5261 Brassicaceae View MSA
123798822 5264 Brassicales-Malvales View MSA
124350577 5266 SBM View MSA
124248854 5268 Malvidae View MSA
124071156 5270 Rosid View MSA
123749054 5271 Pentapetalae View MSA
122791732 5272 Eudicot View MSA
122048332 5273 Angiosperm View MSA
121348595 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.347     High  
cufflinks 0.094     Low  
cufflinks 44.955     High  
cufflinks 0.13     Low  
cufflinks 38.15     High  
cufflinks 0.075     Low  

0 Strain