Gene : AT5G40570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32175//PTHR32175:SF2 - FAMILY NOT NAMED // SURFEIT LOCUS PROTEIN 2 Genomic Order:  3366
Name:  ? AT5G40570 Secondary Identifier:  ? PAC:19671783
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40570 0.5kb upstream 0.5kb upstream 2105 true Chr5: 16246286-16248390 Arabidopsis thaliana
AT5G40570 0.5kb upstream 0.5kb upstream 500 false Chr5: 16246286-16246785 Arabidopsis thaliana
AT5G40570 0.5kb downstream 0.5kb downstream 2105 true Chr5: 16246786-16248890 Arabidopsis thaliana
AT5G40570 0.5kb downstream 0.5kb downstream 500 false Chr5: 16248391-16248890 Arabidopsis thaliana
AT5G40570 1.0kb upstream 1.0kb upstream 2605 true Chr5: 16245786-16248390 Arabidopsis thaliana
AT5G40570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16245786-16246785 Arabidopsis thaliana
AT5G40570 1.0kb downstream 1.0kb downstream 2605 true Chr5: 16246786-16249390 Arabidopsis thaliana
AT5G40570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16248391-16249390 Arabidopsis thaliana
AT5G40570 2.0kb upstream 2.0kb upstream 3605 true Chr5: 16244786-16248390 Arabidopsis thaliana
AT5G40570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16244786-16246785 Arabidopsis thaliana
AT5G40570 2.0kb downstream 2.0kb downstream 3605 true Chr5: 16246786-16250390 Arabidopsis thaliana
AT5G40570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16248391-16250390 Arabidopsis thaliana
AT5G40570 5.0kb upstream 5.0kb upstream 6605 true Chr5: 16241786-16248390 Arabidopsis thaliana
AT5G40570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16241786-16246785 Arabidopsis thaliana
AT5G40570 5.0kb downstream 5.0kb downstream 6605 true Chr5: 16246786-16253390 Arabidopsis thaliana
AT5G40570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16248391-16253390 Arabidopsis thaliana
AT5G40570 10.0kb upstream 10.0kb upstream 11605 true Chr5: 16236786-16248390 Arabidopsis thaliana
AT5G40570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16236786-16246785 Arabidopsis thaliana
AT5G40570 10.0kb downstream 10.0kb downstream 11605 true Chr5: 16246786-16258390 Arabidopsis thaliana
AT5G40570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16248391-16258390 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372328 5261 Brassicaceae View MSA
123800337 5264 Brassicales-Malvales View MSA
124297758 5266 SBM View MSA
124149565 5268 Malvidae View MSA
123875350 5270 Rosid View MSA
123741636 5271 Pentapetalae View MSA
122789257 5272 Eudicot View MSA
122045153 5273 Angiosperm View MSA
121344193 5274 Embryophyte View MSA
123425861 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.907        
cufflinks 2.283       High
cufflinks 0.779       Low
cufflinks 2.135        
cufflinks 0.84        
cufflinks 1.726        

0 Strain