Gene : CRK42 A. thaliana TAIR10
Primary Identifier:  ? AT5G40380 Defline:  (1 of 1) PTHR27002//PTHR27002:SF128 - FAMILY NOT NAMED // CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42
Genomic Order:  3345 Name:  ? AT5G40380
Secondary Identifier:  ? PAC:19668211
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40380 0.5kb upstream 0.5kb upstream 3906 true Chr5: 16151272-16155177 Arabidopsis thaliana
AT5G40380 0.5kb upstream 0.5kb upstream 500 false Chr5: 16151272-16151771 Arabidopsis thaliana
AT5G40380 0.5kb downstream 0.5kb downstream 3906 true Chr5: 16151772-16155677 Arabidopsis thaliana
AT5G40380 0.5kb downstream 0.5kb downstream 500 false Chr5: 16155178-16155677 Arabidopsis thaliana
AT5G40380 1.0kb upstream 1.0kb upstream 4406 true Chr5: 16150772-16155177 Arabidopsis thaliana
AT5G40380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16150772-16151771 Arabidopsis thaliana
AT5G40380 1.0kb downstream 1.0kb downstream 4406 true Chr5: 16151772-16156177 Arabidopsis thaliana
AT5G40380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16155178-16156177 Arabidopsis thaliana
AT5G40380 2.0kb upstream 2.0kb upstream 5406 true Chr5: 16149772-16155177 Arabidopsis thaliana
AT5G40380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16149772-16151771 Arabidopsis thaliana
AT5G40380 2.0kb downstream 2.0kb downstream 5406 true Chr5: 16151772-16157177 Arabidopsis thaliana
AT5G40380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16155178-16157177 Arabidopsis thaliana
AT5G40380 5.0kb upstream 5.0kb upstream 8406 true Chr5: 16146772-16155177 Arabidopsis thaliana
AT5G40380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16146772-16151771 Arabidopsis thaliana
AT5G40380 5.0kb downstream 5.0kb downstream 8406 true Chr5: 16151772-16160177 Arabidopsis thaliana
AT5G40380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16155178-16160177 Arabidopsis thaliana
AT5G40380 10.0kb upstream 10.0kb upstream 13406 true Chr5: 16141772-16155177 Arabidopsis thaliana
AT5G40380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16141772-16151771 Arabidopsis thaliana
AT5G40380 10.0kb downstream 10.0kb downstream 13406 true Chr5: 16151772-16165177 Arabidopsis thaliana
AT5G40380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16155178-16165177 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364793 5261 Brassicaceae View MSA
123831154 5264 Brassicales-Malvales View MSA
124343011 5266 SBM View MSA
124254629 5268 Malvidae View MSA
124072547 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.938        
cufflinks 0.004     Low Low
cufflinks 7.233        
cufflinks 0.018     Low  
cufflinks 6.396        
cufflinks 0.009     Low  

0 Strain