Gene : AT5G40150 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  3321
Name:  ? AT5G40150 Secondary Identifier:  ? PAC:19668224
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40150 0.5kb upstream 0.5kb upstream 2035 true Chr5: 16059509-16061543 Arabidopsis thaliana
AT5G40150 0.5kb upstream 0.5kb upstream 500 false Chr5: 16061044-16061543 Arabidopsis thaliana
AT5G40150 0.5kb downstream 0.5kb downstream 2035 true Chr5: 16059009-16061043 Arabidopsis thaliana
AT5G40150 0.5kb downstream 0.5kb downstream 500 false Chr5: 16059009-16059508 Arabidopsis thaliana
AT5G40150 1.0kb upstream 1.0kb upstream 2535 true Chr5: 16059509-16062043 Arabidopsis thaliana
AT5G40150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16061044-16062043 Arabidopsis thaliana
AT5G40150 1.0kb downstream 1.0kb downstream 2535 true Chr5: 16058509-16061043 Arabidopsis thaliana
AT5G40150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16058509-16059508 Arabidopsis thaliana
AT5G40150 2.0kb upstream 2.0kb upstream 3535 true Chr5: 16059509-16063043 Arabidopsis thaliana
AT5G40150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16061044-16063043 Arabidopsis thaliana
AT5G40150 2.0kb downstream 2.0kb downstream 3535 true Chr5: 16057509-16061043 Arabidopsis thaliana
AT5G40150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16057509-16059508 Arabidopsis thaliana
AT5G40150 5.0kb upstream 5.0kb upstream 6535 true Chr5: 16059509-16066043 Arabidopsis thaliana
AT5G40150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16061044-16066043 Arabidopsis thaliana
AT5G40150 5.0kb downstream 5.0kb downstream 6535 true Chr5: 16054509-16061043 Arabidopsis thaliana
AT5G40150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16054509-16059508 Arabidopsis thaliana
AT5G40150 10.0kb upstream 10.0kb upstream 11535 true Chr5: 16059509-16071043 Arabidopsis thaliana
AT5G40150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16061044-16071043 Arabidopsis thaliana
AT5G40150 10.0kb downstream 10.0kb downstream 11535 true Chr5: 16049509-16061043 Arabidopsis thaliana
AT5G40150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16049509-16059508 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380418 5261 Brassicaceae View MSA
123835779 5264 Brassicales-Malvales View MSA
124346299 5266 SBM View MSA
124240815 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.717        
cufflinks 15.759        
cufflinks 4.817        
cufflinks 11.717        
cufflinks 3.204       Low
cufflinks 19.465       High

0 Strain