Gene : AT5G40230 A. thaliana TAIR10
Defline:  (1 of 50) PF00892 - EamA-like transporter family (EamA) Genomic Order:  3330
Name:  ? AT5G40230 Secondary Identifier:  ? PAC:19665831
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40230 0.5kb upstream 0.5kb upstream 2588 true Chr5: 16079648-16082235 Arabidopsis thaliana
AT5G40230 0.5kb upstream 0.5kb upstream 500 false Chr5: 16081736-16082235 Arabidopsis thaliana
AT5G40230 0.5kb downstream 0.5kb downstream 2588 true Chr5: 16079148-16081735 Arabidopsis thaliana
AT5G40230 0.5kb downstream 0.5kb downstream 500 false Chr5: 16079148-16079647 Arabidopsis thaliana
AT5G40230 1.0kb upstream 1.0kb upstream 3088 true Chr5: 16079648-16082735 Arabidopsis thaliana
AT5G40230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16081736-16082735 Arabidopsis thaliana
AT5G40230 1.0kb downstream 1.0kb downstream 3088 true Chr5: 16078648-16081735 Arabidopsis thaliana
AT5G40230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16078648-16079647 Arabidopsis thaliana
AT5G40230 2.0kb upstream 2.0kb upstream 4088 true Chr5: 16079648-16083735 Arabidopsis thaliana
AT5G40230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16081736-16083735 Arabidopsis thaliana
AT5G40230 2.0kb downstream 2.0kb downstream 4088 true Chr5: 16077648-16081735 Arabidopsis thaliana
AT5G40230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16077648-16079647 Arabidopsis thaliana
AT5G40230 5.0kb upstream 5.0kb upstream 7088 true Chr5: 16079648-16086735 Arabidopsis thaliana
AT5G40230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16081736-16086735 Arabidopsis thaliana
AT5G40230 5.0kb downstream 5.0kb downstream 7088 true Chr5: 16074648-16081735 Arabidopsis thaliana
AT5G40230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16074648-16079647 Arabidopsis thaliana
AT5G40230 10.0kb upstream 10.0kb upstream 12088 true Chr5: 16079648-16091735 Arabidopsis thaliana
AT5G40230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16081736-16091735 Arabidopsis thaliana
AT5G40230 10.0kb downstream 10.0kb downstream 12088 true Chr5: 16069648-16081735 Arabidopsis thaliana
AT5G40230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16069648-16079647 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375466 5261 Brassicaceae View MSA
123840408 5264 Brassicales-Malvales View MSA
124350712 5266 SBM View MSA
124251502 5268 Malvidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.988        
cufflinks 5.873        
cufflinks 0.568       Low
cufflinks 6.916        
cufflinks 0.753       Low
cufflinks 7.183        

0 Strain