Gene : EDL2 A. thaliana TAIR10
Primary Identifier:  ? AT5G39360 Defline:  (1 of 2) PTHR31348//PTHR31348:SF2 - FAMILY NOT NAMED // EID1-LIKE F-BOX PROTEIN 1-RELATED
Genomic Order:  3238 Name:  ? AT5G39360
Secondary Identifier:  ? PAC:19672884
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G39360 0.5kb upstream 0.5kb upstream 2186 true Chr5: 15752992-15755177 Arabidopsis thaliana
AT5G39360 0.5kb upstream 0.5kb upstream 500 false Chr5: 15754678-15755177 Arabidopsis thaliana
AT5G39360 0.5kb downstream 0.5kb downstream 2186 true Chr5: 15752492-15754677 Arabidopsis thaliana
AT5G39360 0.5kb downstream 0.5kb downstream 500 false Chr5: 15752492-15752991 Arabidopsis thaliana
AT5G39360 1.0kb upstream 1.0kb upstream 2686 true Chr5: 15752992-15755677 Arabidopsis thaliana
AT5G39360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15754678-15755677 Arabidopsis thaliana
AT5G39360 1.0kb downstream 1.0kb downstream 2686 true Chr5: 15751992-15754677 Arabidopsis thaliana
AT5G39360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15751992-15752991 Arabidopsis thaliana
AT5G39360 2.0kb upstream 2.0kb upstream 3686 true Chr5: 15752992-15756677 Arabidopsis thaliana
AT5G39360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15754678-15756677 Arabidopsis thaliana
AT5G39360 2.0kb downstream 2.0kb downstream 3686 true Chr5: 15750992-15754677 Arabidopsis thaliana
AT5G39360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15750992-15752991 Arabidopsis thaliana
AT5G39360 5.0kb upstream 5.0kb upstream 6686 true Chr5: 15752992-15759677 Arabidopsis thaliana
AT5G39360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15754678-15759677 Arabidopsis thaliana
AT5G39360 5.0kb downstream 5.0kb downstream 6686 true Chr5: 15747992-15754677 Arabidopsis thaliana
AT5G39360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15747992-15752991 Arabidopsis thaliana
AT5G39360 10.0kb upstream 10.0kb upstream 11686 true Chr5: 15752992-15764677 Arabidopsis thaliana
AT5G39360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15754678-15764677 Arabidopsis thaliana
AT5G39360 10.0kb downstream 10.0kb downstream 11686 true Chr5: 15742992-15754677 Arabidopsis thaliana
AT5G39360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15742992-15752991 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787901 5272 Eudicot View MSA
122370683 5261 Brassicaceae View MSA
123836372 5264 Brassicales-Malvales View MSA
124342870 5266 SBM View MSA
124242566 5268 Malvidae View MSA
124066627 5270 Rosid View MSA
123739494 5271 Pentapetalae View MSA
122043886 5273 Angiosperm View MSA
121350489 5274 Embryophyte View MSA
123381754 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.896        
cufflinks 13.594       High
cufflinks 8.445       Low
cufflinks 12.063        
cufflinks 9.306        
cufflinks 12.087        

0 Strain