Gene : AT5G39320 A. thaliana TAIR10
Defline:  (1 of 5) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  3234
Name:  ? AT5G39320 Secondary Identifier:  ? PAC:19669272
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4821 Arabidopsis thaliana pathologic  
Athaliana PWY-7346 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G39320 0.5kb upstream 0.5kb upstream 2682 true Chr5: 15742262-15744943 Arabidopsis thaliana
AT5G39320 0.5kb upstream 0.5kb upstream 500 false Chr5: 15742262-15742761 Arabidopsis thaliana
AT5G39320 0.5kb downstream 0.5kb downstream 2682 true Chr5: 15742762-15745443 Arabidopsis thaliana
AT5G39320 0.5kb downstream 0.5kb downstream 500 false Chr5: 15744944-15745443 Arabidopsis thaliana
AT5G39320 1.0kb upstream 1.0kb upstream 3182 true Chr5: 15741762-15744943 Arabidopsis thaliana
AT5G39320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15741762-15742761 Arabidopsis thaliana
AT5G39320 1.0kb downstream 1.0kb downstream 3182 true Chr5: 15742762-15745943 Arabidopsis thaliana
AT5G39320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15744944-15745943 Arabidopsis thaliana
AT5G39320 2.0kb upstream 2.0kb upstream 4182 true Chr5: 15740762-15744943 Arabidopsis thaliana
AT5G39320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15740762-15742761 Arabidopsis thaliana
AT5G39320 2.0kb downstream 2.0kb downstream 4182 true Chr5: 15742762-15746943 Arabidopsis thaliana
AT5G39320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15744944-15746943 Arabidopsis thaliana
AT5G39320 5.0kb upstream 5.0kb upstream 7182 true Chr5: 15737762-15744943 Arabidopsis thaliana
AT5G39320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15737762-15742761 Arabidopsis thaliana
AT5G39320 5.0kb downstream 5.0kb downstream 7182 true Chr5: 15742762-15749943 Arabidopsis thaliana
AT5G39320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15744944-15749943 Arabidopsis thaliana
AT5G39320 10.0kb upstream 10.0kb upstream 12182 true Chr5: 15732762-15744943 Arabidopsis thaliana
AT5G39320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15732762-15742761 Arabidopsis thaliana
AT5G39320 10.0kb downstream 10.0kb downstream 12182 true Chr5: 15742762-15754943 Arabidopsis thaliana
AT5G39320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15744944-15754943 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380831 5261 Brassicaceae View MSA
123840319 5264 Brassicales-Malvales View MSA
124349815 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.39        
cufflinks 50.259     High  
cufflinks 13.258        
cufflinks 55.069     High  
cufflinks 9.48       Low
cufflinks 83.623     High High

0 Strain