Gene : AT5G38790 A. thaliana TAIR10
Genomic Order:  3182 Name:  ? AT5G38790
Secondary Identifier:  ? PAC:19672188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G38790 0.5kb upstream 0.5kb upstream 896 true Chr5: 15533285-15534180 Arabidopsis thaliana
AT5G38790 0.5kb upstream 0.5kb upstream 500 false Chr5: 15533285-15533784 Arabidopsis thaliana
AT5G38790 0.5kb downstream 0.5kb downstream 896 true Chr5: 15533785-15534680 Arabidopsis thaliana
AT5G38790 0.5kb downstream 0.5kb downstream 500 false Chr5: 15534181-15534680 Arabidopsis thaliana
AT5G38790 1.0kb upstream 1.0kb upstream 1396 true Chr5: 15532785-15534180 Arabidopsis thaliana
AT5G38790 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15532785-15533784 Arabidopsis thaliana
AT5G38790 1.0kb downstream 1.0kb downstream 1396 true Chr5: 15533785-15535180 Arabidopsis thaliana
AT5G38790 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15534181-15535180 Arabidopsis thaliana
AT5G38790 2.0kb upstream 2.0kb upstream 2396 true Chr5: 15531785-15534180 Arabidopsis thaliana
AT5G38790 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15531785-15533784 Arabidopsis thaliana
AT5G38790 2.0kb downstream 2.0kb downstream 2396 true Chr5: 15533785-15536180 Arabidopsis thaliana
AT5G38790 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15534181-15536180 Arabidopsis thaliana
AT5G38790 5.0kb upstream 5.0kb upstream 5396 true Chr5: 15528785-15534180 Arabidopsis thaliana
AT5G38790 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15528785-15533784 Arabidopsis thaliana
AT5G38790 5.0kb downstream 5.0kb downstream 5396 true Chr5: 15533785-15539180 Arabidopsis thaliana
AT5G38790 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15534181-15539180 Arabidopsis thaliana
AT5G38790 10.0kb upstream 10.0kb upstream 10396 true Chr5: 15523785-15534180 Arabidopsis thaliana
AT5G38790 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15523785-15533784 Arabidopsis thaliana
AT5G38790 10.0kb downstream 10.0kb downstream 10396 true Chr5: 15533785-15544180 Arabidopsis thaliana
AT5G38790 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15534181-15544180 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028773 5273 Angiosperm View MSA
122370115 5261 Brassicaceae View MSA
123837306 5264 Brassicales-Malvales View MSA
124345740 5266 SBM View MSA
124251694 5268 Malvidae View MSA
124062684 5270 Rosid View MSA
123745811 5271 Pentapetalae View MSA
122796444 5272 Eudicot View MSA
121298217 5274 Embryophyte View MSA
123336203 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.115     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.766        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.556        

0 Strain