Gene : AT5G38690 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31169//PTHR31169:SF1 - FAMILY NOT NAMED // ZINC-FINGER DOMAIN OF MONOAMINE-OXIDASE A REPRESSOR R1 PROTEIN Genomic Order:  3172
Name:  ? AT5G38690 Secondary Identifier:  ? PAC:19670655
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G38690 0.5kb upstream 0.5kb upstream 4574 true Chr5: 15479177-15483750 Arabidopsis thaliana
AT5G38690 0.5kb upstream 0.5kb upstream 500 false Chr5: 15483251-15483750 Arabidopsis thaliana
AT5G38690 0.5kb downstream 0.5kb downstream 4574 true Chr5: 15478677-15483250 Arabidopsis thaliana
AT5G38690 0.5kb downstream 0.5kb downstream 500 false Chr5: 15478677-15479176 Arabidopsis thaliana
AT5G38690 1.0kb upstream 1.0kb upstream 5074 true Chr5: 15479177-15484250 Arabidopsis thaliana
AT5G38690 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15483251-15484250 Arabidopsis thaliana
AT5G38690 1.0kb downstream 1.0kb downstream 5074 true Chr5: 15478177-15483250 Arabidopsis thaliana
AT5G38690 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15478177-15479176 Arabidopsis thaliana
AT5G38690 2.0kb upstream 2.0kb upstream 6074 true Chr5: 15479177-15485250 Arabidopsis thaliana
AT5G38690 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15483251-15485250 Arabidopsis thaliana
AT5G38690 2.0kb downstream 2.0kb downstream 6074 true Chr5: 15477177-15483250 Arabidopsis thaliana
AT5G38690 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15477177-15479176 Arabidopsis thaliana
AT5G38690 5.0kb upstream 5.0kb upstream 9074 true Chr5: 15479177-15488250 Arabidopsis thaliana
AT5G38690 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15483251-15488250 Arabidopsis thaliana
AT5G38690 5.0kb downstream 5.0kb downstream 9074 true Chr5: 15474177-15483250 Arabidopsis thaliana
AT5G38690 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15474177-15479176 Arabidopsis thaliana
AT5G38690 10.0kb upstream 10.0kb upstream 14074 true Chr5: 15479177-15493250 Arabidopsis thaliana
AT5G38690 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15483251-15493250 Arabidopsis thaliana
AT5G38690 10.0kb downstream 10.0kb downstream 14074 true Chr5: 15469177-15483250 Arabidopsis thaliana
AT5G38690 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15469177-15479176 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375577 5261 Brassicaceae View MSA
123840930 5264 Brassicales-Malvales View MSA
124349921 5266 SBM View MSA
124237172 5268 Malvidae View MSA
124072248 5270 Rosid View MSA
123741125 5271 Pentapetalae View MSA
122796203 5272 Eudicot View MSA
122042445 5273 Angiosperm View MSA
121349857 5274 Embryophyte View MSA
123427562 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.199        
cufflinks 7.841        
cufflinks 3.443        
cufflinks 7.192        
cufflinks 2.503       Low
cufflinks 9.397       High

0 Strain