Gene : DL1 A. thaliana TAIR10
Primary Identifier:  ? AT5G42080 Defline:  (1 of 1) PTHR11566//PTHR11566:SF58 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1A
Genomic Order:  3530 Name:  ? AT5G42080
Secondary Identifier:  ? PAC:19666542
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Expression

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G42080 0.5kb upstream 0.5kb upstream 4974 true Chr5: 16820284-16825257 Arabidopsis thaliana
AT5G42080 0.5kb upstream 0.5kb upstream 500 false Chr5: 16824758-16825257 Arabidopsis thaliana
AT5G42080 0.5kb downstream 0.5kb downstream 4974 true Chr5: 16819784-16824757 Arabidopsis thaliana
AT5G42080 0.5kb downstream 0.5kb downstream 500 false Chr5: 16819784-16820283 Arabidopsis thaliana
AT5G42080 1.0kb upstream 1.0kb upstream 5474 true Chr5: 16820284-16825757 Arabidopsis thaliana
AT5G42080 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16824758-16825757 Arabidopsis thaliana
AT5G42080 1.0kb downstream 1.0kb downstream 5474 true Chr5: 16819284-16824757 Arabidopsis thaliana
AT5G42080 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16819284-16820283 Arabidopsis thaliana
AT5G42080 2.0kb upstream 2.0kb upstream 6474 true Chr5: 16820284-16826757 Arabidopsis thaliana
AT5G42080 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16824758-16826757 Arabidopsis thaliana
AT5G42080 2.0kb downstream 2.0kb downstream 6474 true Chr5: 16818284-16824757 Arabidopsis thaliana
AT5G42080 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16818284-16820283 Arabidopsis thaliana
AT5G42080 5.0kb upstream 5.0kb upstream 9474 true Chr5: 16820284-16829757 Arabidopsis thaliana
AT5G42080 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16824758-16829757 Arabidopsis thaliana
AT5G42080 5.0kb downstream 5.0kb downstream 9474 true Chr5: 16815284-16824757 Arabidopsis thaliana
AT5G42080 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16815284-16820283 Arabidopsis thaliana
AT5G42080 10.0kb upstream 10.0kb upstream 14474 true Chr5: 16820284-16834757 Arabidopsis thaliana
AT5G42080 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16824758-16834757 Arabidopsis thaliana
AT5G42080 10.0kb downstream 10.0kb downstream 14474 true Chr5: 16810284-16824757 Arabidopsis thaliana
AT5G42080 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16810284-16820283 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371771 5261 Brassicaceae View MSA
123835889 5264 Brassicales-Malvales View MSA
124336627 5266 SBM View MSA
124248183 5268 Malvidae View MSA
124069415 5270 Rosid View MSA
123742432 5271 Pentapetalae View MSA
122789099 5272 Eudicot View MSA
122041649 5273 Angiosperm View MSA
121348434 5274 Embryophyte View MSA
123428236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.492        
cufflinks 21.931        
cufflinks 12.306       Low
cufflinks 22.52        
cufflinks 13.427        
cufflinks 27.214       High

0 Strain