Gene : AT5G42130 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24089//PTHR24089:SF221 - FAMILY NOT NAMED // PROTEIN MITOFERRINLIKE 1, CHLOROPLASTIC Genomic Order:  3535
Name:  ? AT5G42130 Secondary Identifier:  ? PAC:19670843
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G42130 0.5kb upstream 0.5kb upstream 2041 true Chr5: 16835299-16837339 Arabidopsis thaliana
AT5G42130 0.5kb upstream 0.5kb upstream 500 false Chr5: 16836840-16837339 Arabidopsis thaliana
AT5G42130 0.5kb downstream 0.5kb downstream 2041 true Chr5: 16834799-16836839 Arabidopsis thaliana
AT5G42130 0.5kb downstream 0.5kb downstream 500 false Chr5: 16834799-16835298 Arabidopsis thaliana
AT5G42130 1.0kb upstream 1.0kb upstream 2541 true Chr5: 16835299-16837839 Arabidopsis thaliana
AT5G42130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16836840-16837839 Arabidopsis thaliana
AT5G42130 1.0kb downstream 1.0kb downstream 2541 true Chr5: 16834299-16836839 Arabidopsis thaliana
AT5G42130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16834299-16835298 Arabidopsis thaliana
AT5G42130 2.0kb upstream 2.0kb upstream 3541 true Chr5: 16835299-16838839 Arabidopsis thaliana
AT5G42130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16836840-16838839 Arabidopsis thaliana
AT5G42130 2.0kb downstream 2.0kb downstream 3541 true Chr5: 16833299-16836839 Arabidopsis thaliana
AT5G42130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16833299-16835298 Arabidopsis thaliana
AT5G42130 5.0kb upstream 5.0kb upstream 6541 true Chr5: 16835299-16841839 Arabidopsis thaliana
AT5G42130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16836840-16841839 Arabidopsis thaliana
AT5G42130 5.0kb downstream 5.0kb downstream 6541 true Chr5: 16830299-16836839 Arabidopsis thaliana
AT5G42130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16830299-16835298 Arabidopsis thaliana
AT5G42130 10.0kb upstream 10.0kb upstream 11541 true Chr5: 16835299-16846839 Arabidopsis thaliana
AT5G42130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16836840-16846839 Arabidopsis thaliana
AT5G42130 10.0kb downstream 10.0kb downstream 11541 true Chr5: 16825299-16836839 Arabidopsis thaliana
AT5G42130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16825299-16835298 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374913 5261 Brassicaceae View MSA
123830218 5264 Brassicales-Malvales View MSA
124345111 5266 SBM View MSA
124240147 5268 Malvidae View MSA
124061310 5270 Rosid View MSA
123740418 5271 Pentapetalae View MSA
122789090 5272 Eudicot View MSA
122045517 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121345097 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.782       High
cufflinks 8.584        
cufflinks 21.96       High
cufflinks 8.51        
cufflinks 14.599        
cufflinks 9.01        

0 Strain