Gene : MED10A A. thaliana TAIR10
Primary Identifier:  ? AT5G41910 Defline:  (1 of 2) K15151 - mediator of RNA polymerase II transcription subunit 10 (MED10, NUT2)
Genomic Order:  3512 Name:  ? AT5G41910
Secondary Identifier:  ? PAC:19666062
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41910 0.5kb upstream 0.5kb upstream 1720 true Chr5: 16778055-16779774 Arabidopsis thaliana
AT5G41910 0.5kb upstream 0.5kb upstream 500 false Chr5: 16779275-16779774 Arabidopsis thaliana
AT5G41910 0.5kb downstream 0.5kb downstream 1720 true Chr5: 16777555-16779274 Arabidopsis thaliana
AT5G41910 0.5kb downstream 0.5kb downstream 500 false Chr5: 16777555-16778054 Arabidopsis thaliana
AT5G41910 1.0kb upstream 1.0kb upstream 2220 true Chr5: 16778055-16780274 Arabidopsis thaliana
AT5G41910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16779275-16780274 Arabidopsis thaliana
AT5G41910 1.0kb downstream 1.0kb downstream 2220 true Chr5: 16777055-16779274 Arabidopsis thaliana
AT5G41910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16777055-16778054 Arabidopsis thaliana
AT5G41910 2.0kb upstream 2.0kb upstream 3220 true Chr5: 16778055-16781274 Arabidopsis thaliana
AT5G41910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16779275-16781274 Arabidopsis thaliana
AT5G41910 2.0kb downstream 2.0kb downstream 3220 true Chr5: 16776055-16779274 Arabidopsis thaliana
AT5G41910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16776055-16778054 Arabidopsis thaliana
AT5G41910 5.0kb upstream 5.0kb upstream 6220 true Chr5: 16778055-16784274 Arabidopsis thaliana
AT5G41910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16779275-16784274 Arabidopsis thaliana
AT5G41910 5.0kb downstream 5.0kb downstream 6220 true Chr5: 16773055-16779274 Arabidopsis thaliana
AT5G41910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16773055-16778054 Arabidopsis thaliana
AT5G41910 10.0kb upstream 10.0kb upstream 11220 true Chr5: 16778055-16789274 Arabidopsis thaliana
AT5G41910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16779275-16789274 Arabidopsis thaliana
AT5G41910 10.0kb downstream 10.0kb downstream 11220 true Chr5: 16768055-16779274 Arabidopsis thaliana
AT5G41910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16768055-16778054 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495854 5273 Angiosperm View MSA
122332155 5261 Brassicaceae View MSA
123773256 5264 Brassicales-Malvales View MSA
124271748 5266 SBM View MSA
124127707 5268 Malvidae View MSA
123856528 5270 Rosid View MSA
123442445 5271 Pentapetalae View MSA
122478022 5272 Eudicot View MSA
120769215 5274 Embryophyte View MSA
122811584 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.632        
cufflinks 6.825        
cufflinks 5.92       Low
cufflinks 7.129       High
cufflinks 5.982        
cufflinks 6.25        

0 Strain