Gene : AT5G41770 A. thaliana TAIR10
Defline:  (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) Genomic Order:  3496
Name:  ? AT5G41770 Secondary Identifier:  ? PAC:19667779
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41770 0.5kb upstream 0.5kb upstream 3727 true Chr5: 16717496-16721222 Arabidopsis thaliana
AT5G41770 0.5kb upstream 0.5kb upstream 500 false Chr5: 16717496-16717995 Arabidopsis thaliana
AT5G41770 0.5kb downstream 0.5kb downstream 3727 true Chr5: 16717996-16721722 Arabidopsis thaliana
AT5G41770 0.5kb downstream 0.5kb downstream 500 false Chr5: 16721223-16721722 Arabidopsis thaliana
AT5G41770 1.0kb upstream 1.0kb upstream 4227 true Chr5: 16716996-16721222 Arabidopsis thaliana
AT5G41770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16716996-16717995 Arabidopsis thaliana
AT5G41770 1.0kb downstream 1.0kb downstream 4227 true Chr5: 16717996-16722222 Arabidopsis thaliana
AT5G41770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16721223-16722222 Arabidopsis thaliana
AT5G41770 2.0kb upstream 2.0kb upstream 5227 true Chr5: 16715996-16721222 Arabidopsis thaliana
AT5G41770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16715996-16717995 Arabidopsis thaliana
AT5G41770 2.0kb downstream 2.0kb downstream 5227 true Chr5: 16717996-16723222 Arabidopsis thaliana
AT5G41770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16721223-16723222 Arabidopsis thaliana
AT5G41770 5.0kb upstream 5.0kb upstream 8227 true Chr5: 16712996-16721222 Arabidopsis thaliana
AT5G41770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16712996-16717995 Arabidopsis thaliana
AT5G41770 5.0kb downstream 5.0kb downstream 8227 true Chr5: 16717996-16726222 Arabidopsis thaliana
AT5G41770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16721223-16726222 Arabidopsis thaliana
AT5G41770 10.0kb upstream 10.0kb upstream 13227 true Chr5: 16707996-16721222 Arabidopsis thaliana
AT5G41770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16707996-16717995 Arabidopsis thaliana
AT5G41770 10.0kb downstream 10.0kb downstream 13227 true Chr5: 16717996-16731222 Arabidopsis thaliana
AT5G41770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16721223-16731222 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366655 5261 Brassicaceae View MSA
123834223 5264 Brassicales-Malvales View MSA
124345838 5266 SBM View MSA
124239978 5268 Malvidae View MSA
124066520 5270 Rosid View MSA
123747782 5271 Pentapetalae View MSA
122796524 5272 Eudicot View MSA
122043261 5273 Angiosperm View MSA
121344122 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.253        
cufflinks 22.915        
cufflinks 14.389       Low
cufflinks 25.01        
cufflinks 13.976       Low
cufflinks 27.129       High

0 Strain