Gene : BTI3 A. thaliana TAIR10
Primary Identifier:  ? AT5G41600 Defline:  (1 of 2) PTHR10994:SF70 - RETICULON-LIKE PROTEIN B4
Genomic Order:  3476 Name:  ? AT5G41600
Secondary Identifier:  ? PAC:19669332
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41600 0.5kb upstream 0.5kb upstream 2064 true Chr5: 16635630-16637693 Arabidopsis thaliana
AT5G41600 0.5kb upstream 0.5kb upstream 500 false Chr5: 16635630-16636129 Arabidopsis thaliana
AT5G41600 0.5kb downstream 0.5kb downstream 2064 true Chr5: 16636130-16638193 Arabidopsis thaliana
AT5G41600 0.5kb downstream 0.5kb downstream 500 false Chr5: 16637694-16638193 Arabidopsis thaliana
AT5G41600 1.0kb upstream 1.0kb upstream 2564 true Chr5: 16635130-16637693 Arabidopsis thaliana
AT5G41600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16635130-16636129 Arabidopsis thaliana
AT5G41600 1.0kb downstream 1.0kb downstream 2564 true Chr5: 16636130-16638693 Arabidopsis thaliana
AT5G41600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16637694-16638693 Arabidopsis thaliana
AT5G41600 2.0kb upstream 2.0kb upstream 3564 true Chr5: 16634130-16637693 Arabidopsis thaliana
AT5G41600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16634130-16636129 Arabidopsis thaliana
AT5G41600 2.0kb downstream 2.0kb downstream 3564 true Chr5: 16636130-16639693 Arabidopsis thaliana
AT5G41600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16637694-16639693 Arabidopsis thaliana
AT5G41600 5.0kb upstream 5.0kb upstream 6564 true Chr5: 16631130-16637693 Arabidopsis thaliana
AT5G41600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16631130-16636129 Arabidopsis thaliana
AT5G41600 5.0kb downstream 5.0kb downstream 6564 true Chr5: 16636130-16642693 Arabidopsis thaliana
AT5G41600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16637694-16642693 Arabidopsis thaliana
AT5G41600 10.0kb upstream 10.0kb upstream 11564 true Chr5: 16626130-16637693 Arabidopsis thaliana
AT5G41600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16626130-16636129 Arabidopsis thaliana
AT5G41600 10.0kb downstream 10.0kb downstream 11564 true Chr5: 16636130-16647693 Arabidopsis thaliana
AT5G41600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16637694-16647693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343424 5261 Brassicaceae View MSA
123837216 5264 Brassicales-Malvales View MSA
124349804 5266 SBM View MSA
124252411 5268 Malvidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.704     High Low
cufflinks 80.47     High  
cufflinks 40.445     High  
cufflinks 81.959     High  
cufflinks 46.684     High  
cufflinks 87.912     High High

0 Strain