Gene : AT5G41670 A. thaliana TAIR10
Defline:  (1 of 3) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase Genomic Order:  3484
Name:  ? AT5G41670 Secondary Identifier:  ? PAC:19666714
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana OXIDATIVEPENT-PWY Arabidopsis thaliana pathologic  
Athaliana PENTOSE-P-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41670 0.5kb upstream 0.5kb upstream 2389 true Chr5: 16665283-16667671 Arabidopsis thaliana
AT5G41670 0.5kb upstream 0.5kb upstream 500 false Chr5: 16667172-16667671 Arabidopsis thaliana
AT5G41670 0.5kb downstream 0.5kb downstream 2389 true Chr5: 16664783-16667171 Arabidopsis thaliana
AT5G41670 0.5kb downstream 0.5kb downstream 500 false Chr5: 16664783-16665282 Arabidopsis thaliana
AT5G41670 1.0kb upstream 1.0kb upstream 2889 true Chr5: 16665283-16668171 Arabidopsis thaliana
AT5G41670 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16667172-16668171 Arabidopsis thaliana
AT5G41670 1.0kb downstream 1.0kb downstream 2889 true Chr5: 16664283-16667171 Arabidopsis thaliana
AT5G41670 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16664283-16665282 Arabidopsis thaliana
AT5G41670 2.0kb upstream 2.0kb upstream 3889 true Chr5: 16665283-16669171 Arabidopsis thaliana
AT5G41670 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16667172-16669171 Arabidopsis thaliana
AT5G41670 2.0kb downstream 2.0kb downstream 3889 true Chr5: 16663283-16667171 Arabidopsis thaliana
AT5G41670 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16663283-16665282 Arabidopsis thaliana
AT5G41670 5.0kb upstream 5.0kb upstream 6889 true Chr5: 16665283-16672171 Arabidopsis thaliana
AT5G41670 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16667172-16672171 Arabidopsis thaliana
AT5G41670 5.0kb downstream 5.0kb downstream 6889 true Chr5: 16660283-16667171 Arabidopsis thaliana
AT5G41670 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16660283-16665282 Arabidopsis thaliana
AT5G41670 10.0kb upstream 10.0kb upstream 11889 true Chr5: 16665283-16677171 Arabidopsis thaliana
AT5G41670 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16667172-16677171 Arabidopsis thaliana
AT5G41670 10.0kb downstream 10.0kb downstream 11889 true Chr5: 16655283-16667171 Arabidopsis thaliana
AT5G41670 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16655283-16665282 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376033 5261 Brassicaceae View MSA
123827873 5264 Brassicales-Malvales View MSA
124345460 5266 SBM View MSA
124242189 5268 Malvidae View MSA
124062586 5270 Rosid View MSA
123741270 5271 Pentapetalae View MSA
122792444 5272 Eudicot View MSA
122047871 5273 Angiosperm View MSA
121351017 5274 Embryophyte View MSA
123424238 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.981        
cufflinks 17.516        
cufflinks 17.5        
cufflinks 24.583        
cufflinks 14.958        
cufflinks 36.058     High High

0 Strain