Gene : AT5G41280 A. thaliana TAIR10
Defline:  (1 of 11) PTHR32099//PTHR32099:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN // CYSTEINE-RICH REPEAT SECRETORY PROTEIN 1-RELATED Genomic Order:  3442
Name:  ? AT5G41280 Secondary Identifier:  ? PAC:19667331
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41280 0.5kb upstream 0.5kb upstream 1921 true Chr5: 16509009-16510929 Arabidopsis thaliana
AT5G41280 0.5kb upstream 0.5kb upstream 500 false Chr5: 16509009-16509508 Arabidopsis thaliana
AT5G41280 0.5kb downstream 0.5kb downstream 1921 true Chr5: 16509509-16511429 Arabidopsis thaliana
AT5G41280 0.5kb downstream 0.5kb downstream 500 false Chr5: 16510930-16511429 Arabidopsis thaliana
AT5G41280 1.0kb upstream 1.0kb upstream 2421 true Chr5: 16508509-16510929 Arabidopsis thaliana
AT5G41280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16508509-16509508 Arabidopsis thaliana
AT5G41280 1.0kb downstream 1.0kb downstream 2421 true Chr5: 16509509-16511929 Arabidopsis thaliana
AT5G41280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16510930-16511929 Arabidopsis thaliana
AT5G41280 2.0kb upstream 2.0kb upstream 3421 true Chr5: 16507509-16510929 Arabidopsis thaliana
AT5G41280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16507509-16509508 Arabidopsis thaliana
AT5G41280 2.0kb downstream 2.0kb downstream 3421 true Chr5: 16509509-16512929 Arabidopsis thaliana
AT5G41280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16510930-16512929 Arabidopsis thaliana
AT5G41280 5.0kb upstream 5.0kb upstream 6421 true Chr5: 16504509-16510929 Arabidopsis thaliana
AT5G41280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16504509-16509508 Arabidopsis thaliana
AT5G41280 5.0kb downstream 5.0kb downstream 6421 true Chr5: 16509509-16515929 Arabidopsis thaliana
AT5G41280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16510930-16515929 Arabidopsis thaliana
AT5G41280 10.0kb upstream 10.0kb upstream 11421 true Chr5: 16499509-16510929 Arabidopsis thaliana
AT5G41280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16499509-16509508 Arabidopsis thaliana
AT5G41280 10.0kb downstream 10.0kb downstream 11421 true Chr5: 16509509-16520929 Arabidopsis thaliana
AT5G41280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16510930-16520929 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377158 5261 Brassicaceae View MSA
123841485 5264 Brassicales-Malvales View MSA
124348242 5266 SBM View MSA
124252331 5268 Malvidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low  
cufflinks 0.202     Low  
cufflinks 0.025     Low Low
cufflinks 0.579        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.286       High

0 Strain