Gene : AT5G41130 A. thaliana TAIR10
Defline:  (1 of 5) PTHR22753//PTHR22753:SF8 - FAMILY NOT NAMED // ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN-RELATED Genomic Order:  3428
Name:  ? AT5G41130 Secondary Identifier:  ? PAC:19672031
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRIGLSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41130 0.5kb upstream 0.5kb upstream 4189 true Chr5: 16459584-16463772 Arabidopsis thaliana
AT5G41130 0.5kb upstream 0.5kb upstream 500 false Chr5: 16463273-16463772 Arabidopsis thaliana
AT5G41130 0.5kb downstream 0.5kb downstream 4189 true Chr5: 16459084-16463272 Arabidopsis thaliana
AT5G41130 0.5kb downstream 0.5kb downstream 500 false Chr5: 16459084-16459583 Arabidopsis thaliana
AT5G41130 1.0kb upstream 1.0kb upstream 4689 true Chr5: 16459584-16464272 Arabidopsis thaliana
AT5G41130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16463273-16464272 Arabidopsis thaliana
AT5G41130 1.0kb downstream 1.0kb downstream 4689 true Chr5: 16458584-16463272 Arabidopsis thaliana
AT5G41130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16458584-16459583 Arabidopsis thaliana
AT5G41130 2.0kb upstream 2.0kb upstream 5689 true Chr5: 16459584-16465272 Arabidopsis thaliana
AT5G41130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16463273-16465272 Arabidopsis thaliana
AT5G41130 2.0kb downstream 2.0kb downstream 5689 true Chr5: 16457584-16463272 Arabidopsis thaliana
AT5G41130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16457584-16459583 Arabidopsis thaliana
AT5G41130 5.0kb upstream 5.0kb upstream 8689 true Chr5: 16459584-16468272 Arabidopsis thaliana
AT5G41130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16463273-16468272 Arabidopsis thaliana
AT5G41130 5.0kb downstream 5.0kb downstream 8689 true Chr5: 16454584-16463272 Arabidopsis thaliana
AT5G41130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16454584-16459583 Arabidopsis thaliana
AT5G41130 10.0kb upstream 10.0kb upstream 13689 true Chr5: 16459584-16473272 Arabidopsis thaliana
AT5G41130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16463273-16473272 Arabidopsis thaliana
AT5G41130 10.0kb downstream 10.0kb downstream 13689 true Chr5: 16449584-16463272 Arabidopsis thaliana
AT5G41130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16449584-16459583 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379427 5261 Brassicaceae View MSA
123841244 5264 Brassicales-Malvales View MSA
124345197 5266 SBM View MSA
124241447 5268 Malvidae View MSA
124067934 5270 Rosid View MSA
123736438 5271 Pentapetalae View MSA
122797554 5272 Eudicot View MSA
122050475 5273 Angiosperm View MSA
121351319 5274 Embryophyte View MSA
123428333 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.054        
cufflinks 3.073        
cufflinks 0.837        
cufflinks 2.92        
cufflinks 0.8       Low
cufflinks 2.788        

0 Strain