Gene : UVH1 A. thaliana TAIR10
Primary Identifier:  ? AT5G41150 Defline:  (1 of 1) K10848 - DNA excision repair protein ERCC-4 (ERCC4, XPF)
Genomic Order:  3430 Name:  ? AT5G41150
Secondary Identifier:  ? PAC:19667751
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41150 0.5kb upstream 0.5kb upstream 4750 true Chr5: 16472764-16477513 Arabidopsis thaliana
AT5G41150 0.5kb upstream 0.5kb upstream 500 false Chr5: 16477014-16477513 Arabidopsis thaliana
AT5G41150 0.5kb downstream 0.5kb downstream 4750 true Chr5: 16472264-16477013 Arabidopsis thaliana
AT5G41150 0.5kb downstream 0.5kb downstream 500 false Chr5: 16472264-16472763 Arabidopsis thaliana
AT5G41150 1.0kb upstream 1.0kb upstream 5250 true Chr5: 16472764-16478013 Arabidopsis thaliana
AT5G41150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16477014-16478013 Arabidopsis thaliana
AT5G41150 1.0kb downstream 1.0kb downstream 5250 true Chr5: 16471764-16477013 Arabidopsis thaliana
AT5G41150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16471764-16472763 Arabidopsis thaliana
AT5G41150 2.0kb upstream 2.0kb upstream 6250 true Chr5: 16472764-16479013 Arabidopsis thaliana
AT5G41150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16477014-16479013 Arabidopsis thaliana
AT5G41150 2.0kb downstream 2.0kb downstream 6250 true Chr5: 16470764-16477013 Arabidopsis thaliana
AT5G41150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16470764-16472763 Arabidopsis thaliana
AT5G41150 5.0kb upstream 5.0kb upstream 9250 true Chr5: 16472764-16482013 Arabidopsis thaliana
AT5G41150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16477014-16482013 Arabidopsis thaliana
AT5G41150 5.0kb downstream 5.0kb downstream 9250 true Chr5: 16467764-16477013 Arabidopsis thaliana
AT5G41150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16467764-16472763 Arabidopsis thaliana
AT5G41150 10.0kb upstream 10.0kb upstream 14250 true Chr5: 16472764-16487013 Arabidopsis thaliana
AT5G41150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16477014-16487013 Arabidopsis thaliana
AT5G41150 10.0kb downstream 10.0kb downstream 14250 true Chr5: 16462764-16477013 Arabidopsis thaliana
AT5G41150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16462764-16472763 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026556 5273 Angiosperm View MSA
122362013 5261 Brassicaceae View MSA
123832383 5264 Brassicales-Malvales View MSA
124344453 5266 SBM View MSA
124239981 5268 Malvidae View MSA
124065772 5270 Rosid View MSA
123749861 5271 Pentapetalae View MSA
122792541 5272 Eudicot View MSA
121346199 5274 Embryophyte View MSA
123424869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.886        
cufflinks 3.142        
cufflinks 2.504       Low
cufflinks 3.522       High
cufflinks 2.604        
cufflinks 3.304        

0 Strain