Gene : GSTT1 A. thaliana TAIR10
Primary Identifier:  ? AT5G41210 Defline:  (1 of 3) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN
Genomic Order:  3436 Name:  ? AT5G41210
Secondary Identifier:  ? PAC:19665468
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6842 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41210 0.5kb upstream 0.5kb upstream 2175 true Chr5: 16492320-16494494 Arabidopsis thaliana
AT5G41210 0.5kb upstream 0.5kb upstream 500 false Chr5: 16493995-16494494 Arabidopsis thaliana
AT5G41210 0.5kb downstream 0.5kb downstream 2175 true Chr5: 16491820-16493994 Arabidopsis thaliana
AT5G41210 0.5kb downstream 0.5kb downstream 500 false Chr5: 16491820-16492319 Arabidopsis thaliana
AT5G41210 1.0kb upstream 1.0kb upstream 2675 true Chr5: 16492320-16494994 Arabidopsis thaliana
AT5G41210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16493995-16494994 Arabidopsis thaliana
AT5G41210 1.0kb downstream 1.0kb downstream 2675 true Chr5: 16491320-16493994 Arabidopsis thaliana
AT5G41210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16491320-16492319 Arabidopsis thaliana
AT5G41210 2.0kb upstream 2.0kb upstream 3675 true Chr5: 16492320-16495994 Arabidopsis thaliana
AT5G41210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16493995-16495994 Arabidopsis thaliana
AT5G41210 2.0kb downstream 2.0kb downstream 3675 true Chr5: 16490320-16493994 Arabidopsis thaliana
AT5G41210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16490320-16492319 Arabidopsis thaliana
AT5G41210 5.0kb upstream 5.0kb upstream 6675 true Chr5: 16492320-16498994 Arabidopsis thaliana
AT5G41210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16493995-16498994 Arabidopsis thaliana
AT5G41210 5.0kb downstream 5.0kb downstream 6675 true Chr5: 16487320-16493994 Arabidopsis thaliana
AT5G41210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16487320-16492319 Arabidopsis thaliana
AT5G41210 10.0kb upstream 10.0kb upstream 11675 true Chr5: 16492320-16503994 Arabidopsis thaliana
AT5G41210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16493995-16503994 Arabidopsis thaliana
AT5G41210 10.0kb downstream 10.0kb downstream 11675 true Chr5: 16482320-16493994 Arabidopsis thaliana
AT5G41210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16482320-16492319 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122374727 5261 Brassicaceae View MSA
123835708 5264 Brassicales-Malvales View MSA
124339383 5266 SBM View MSA
124240290 5268 Malvidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.711     High  
cufflinks 36.942     High  
cufflinks 56.128     High  
cufflinks 35.326     High  
cufflinks 60.387     High High
cufflinks 32.877     High Low

0 Strain