Gene : AT5G41050 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31614:SF3 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  3418
Name:  ? AT5G41050 Secondary Identifier:  ? PAC:19667780
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41050 0.5kb upstream 0.5kb upstream 1502 true Chr5: 16433317-16434818 Arabidopsis thaliana
AT5G41050 0.5kb upstream 0.5kb upstream 500 false Chr5: 16434319-16434818 Arabidopsis thaliana
AT5G41050 0.5kb downstream 0.5kb downstream 1502 true Chr5: 16432817-16434318 Arabidopsis thaliana
AT5G41050 0.5kb downstream 0.5kb downstream 500 false Chr5: 16432817-16433316 Arabidopsis thaliana
AT5G41050 1.0kb upstream 1.0kb upstream 2002 true Chr5: 16433317-16435318 Arabidopsis thaliana
AT5G41050 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16434319-16435318 Arabidopsis thaliana
AT5G41050 1.0kb downstream 1.0kb downstream 2002 true Chr5: 16432317-16434318 Arabidopsis thaliana
AT5G41050 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16432317-16433316 Arabidopsis thaliana
AT5G41050 2.0kb upstream 2.0kb upstream 3002 true Chr5: 16433317-16436318 Arabidopsis thaliana
AT5G41050 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16434319-16436318 Arabidopsis thaliana
AT5G41050 2.0kb downstream 2.0kb downstream 3002 true Chr5: 16431317-16434318 Arabidopsis thaliana
AT5G41050 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16431317-16433316 Arabidopsis thaliana
AT5G41050 5.0kb upstream 5.0kb upstream 6002 true Chr5: 16433317-16439318 Arabidopsis thaliana
AT5G41050 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16434319-16439318 Arabidopsis thaliana
AT5G41050 5.0kb downstream 5.0kb downstream 6002 true Chr5: 16428317-16434318 Arabidopsis thaliana
AT5G41050 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16428317-16433316 Arabidopsis thaliana
AT5G41050 10.0kb upstream 10.0kb upstream 11002 true Chr5: 16433317-16444318 Arabidopsis thaliana
AT5G41050 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16434319-16444318 Arabidopsis thaliana
AT5G41050 10.0kb downstream 10.0kb downstream 11002 true Chr5: 16423317-16434318 Arabidopsis thaliana
AT5G41050 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16423317-16433316 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369159 5261 Brassicaceae View MSA
123840400 5264 Brassicales-Malvales View MSA
124338142 5266 SBM View MSA
124254567 5268 Malvidae View MSA
124060655 5270 Rosid View MSA
123753295 5271 Pentapetalae View MSA
122796596 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.635        
cufflinks 0.318     Low  
cufflinks 11.682        
cufflinks 0.264     Low  
cufflinks 10.339        
cufflinks 0.214     Low Low

0 Strain