Gene : AT5G40860 A. thaliana TAIR10
Genomic Order:  3399 Name:  ? AT5G40860
Secondary Identifier:  ? PAC:19673265
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40860 0.5kb upstream 0.5kb upstream 2118 true Chr5: 16369868-16371985 Arabidopsis thaliana
AT5G40860 0.5kb upstream 0.5kb upstream 500 false Chr5: 16369868-16370367 Arabidopsis thaliana
AT5G40860 0.5kb downstream 0.5kb downstream 2118 true Chr5: 16370368-16372485 Arabidopsis thaliana
AT5G40860 0.5kb downstream 0.5kb downstream 500 false Chr5: 16371986-16372485 Arabidopsis thaliana
AT5G40860 1.0kb upstream 1.0kb upstream 2618 true Chr5: 16369368-16371985 Arabidopsis thaliana
AT5G40860 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16369368-16370367 Arabidopsis thaliana
AT5G40860 1.0kb downstream 1.0kb downstream 2618 true Chr5: 16370368-16372985 Arabidopsis thaliana
AT5G40860 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16371986-16372985 Arabidopsis thaliana
AT5G40860 2.0kb upstream 2.0kb upstream 3618 true Chr5: 16368368-16371985 Arabidopsis thaliana
AT5G40860 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16368368-16370367 Arabidopsis thaliana
AT5G40860 2.0kb downstream 2.0kb downstream 3618 true Chr5: 16370368-16373985 Arabidopsis thaliana
AT5G40860 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16371986-16373985 Arabidopsis thaliana
AT5G40860 5.0kb upstream 5.0kb upstream 6618 true Chr5: 16365368-16371985 Arabidopsis thaliana
AT5G40860 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16365368-16370367 Arabidopsis thaliana
AT5G40860 5.0kb downstream 5.0kb downstream 6618 true Chr5: 16370368-16376985 Arabidopsis thaliana
AT5G40860 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16371986-16376985 Arabidopsis thaliana
AT5G40860 10.0kb upstream 10.0kb upstream 11618 true Chr5: 16360368-16371985 Arabidopsis thaliana
AT5G40860 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16360368-16370367 Arabidopsis thaliana
AT5G40860 10.0kb downstream 10.0kb downstream 11618 true Chr5: 16370368-16381985 Arabidopsis thaliana
AT5G40860 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16371986-16381985 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377645 5261 Brassicaceae View MSA
123801593 5264 Brassicales-Malvales View MSA
124298876 5266 SBM View MSA
124150420 5268 Malvidae View MSA
123876035 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.083     Low  
cufflinks 0.018     Low  
cufflinks 0.305     Low  
cufflinks 0.01     Low Low
cufflinks 0.361       High

0 Strain