Gene : AT5G40740 A. thaliana TAIR10
Defline:  (1 of 1) PF14661 - HAUS augmin-like complex subunit 6 N-terminus (HAUS6_N) Genomic Order:  3385
Name:  ? AT5G40740 Secondary Identifier:  ? PAC:19669921
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40740 0.5kb upstream 0.5kb upstream 5000 true Chr5: 16301914-16306913 Arabidopsis thaliana
AT5G40740 0.5kb upstream 0.5kb upstream 500 false Chr5: 16306414-16306913 Arabidopsis thaliana
AT5G40740 0.5kb downstream 0.5kb downstream 5000 true Chr5: 16301414-16306413 Arabidopsis thaliana
AT5G40740 0.5kb downstream 0.5kb downstream 500 false Chr5: 16301414-16301913 Arabidopsis thaliana
AT5G40740 1.0kb upstream 1.0kb upstream 5500 true Chr5: 16301914-16307413 Arabidopsis thaliana
AT5G40740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16306414-16307413 Arabidopsis thaliana
AT5G40740 1.0kb downstream 1.0kb downstream 5500 true Chr5: 16300914-16306413 Arabidopsis thaliana
AT5G40740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16300914-16301913 Arabidopsis thaliana
AT5G40740 2.0kb upstream 2.0kb upstream 6500 true Chr5: 16301914-16308413 Arabidopsis thaliana
AT5G40740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16306414-16308413 Arabidopsis thaliana
AT5G40740 2.0kb downstream 2.0kb downstream 6500 true Chr5: 16299914-16306413 Arabidopsis thaliana
AT5G40740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16299914-16301913 Arabidopsis thaliana
AT5G40740 5.0kb upstream 5.0kb upstream 9500 true Chr5: 16301914-16311413 Arabidopsis thaliana
AT5G40740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16306414-16311413 Arabidopsis thaliana
AT5G40740 5.0kb downstream 5.0kb downstream 9500 true Chr5: 16296914-16306413 Arabidopsis thaliana
AT5G40740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16296914-16301913 Arabidopsis thaliana
AT5G40740 10.0kb upstream 10.0kb upstream 14500 true Chr5: 16301914-16316413 Arabidopsis thaliana
AT5G40740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16306414-16316413 Arabidopsis thaliana
AT5G40740 10.0kb downstream 10.0kb downstream 14500 true Chr5: 16291914-16306413 Arabidopsis thaliana
AT5G40740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16291914-16301913 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377768 5261 Brassicaceae View MSA
123835598 5264 Brassicales-Malvales View MSA
124338483 5266 SBM View MSA
124242902 5268 Malvidae View MSA
124068575 5270 Rosid View MSA
123744208 5271 Pentapetalae View MSA
122793152 5272 Eudicot View MSA
122045582 5273 Angiosperm View MSA
121351307 5274 Embryophyte View MSA
123382113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.604        
cufflinks 11.706        
cufflinks 4.45        
cufflinks 12.467       High
cufflinks 4.877        
cufflinks 10.62        

0 Strain