Gene : PHB3 A. thaliana TAIR10
Primary Identifier:  ? AT5G40770 Defline:  (1 of 3) K17080 - prohibitin 1 (PHB1)
Genomic Order:  3388 Name:  ? AT5G40770
Secondary Identifier:  ? PAC:19668653
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40770 0.5kb upstream 0.5kb upstream 2370 true Chr5: 16314850-16317219 Arabidopsis thaliana
AT5G40770 0.5kb upstream 0.5kb upstream 500 false Chr5: 16316720-16317219 Arabidopsis thaliana
AT5G40770 0.5kb downstream 0.5kb downstream 2370 true Chr5: 16314350-16316719 Arabidopsis thaliana
AT5G40770 0.5kb downstream 0.5kb downstream 500 false Chr5: 16314350-16314849 Arabidopsis thaliana
AT5G40770 1.0kb upstream 1.0kb upstream 2870 true Chr5: 16314850-16317719 Arabidopsis thaliana
AT5G40770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16316720-16317719 Arabidopsis thaliana
AT5G40770 1.0kb downstream 1.0kb downstream 2870 true Chr5: 16313850-16316719 Arabidopsis thaliana
AT5G40770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16313850-16314849 Arabidopsis thaliana
AT5G40770 2.0kb upstream 2.0kb upstream 3870 true Chr5: 16314850-16318719 Arabidopsis thaliana
AT5G40770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16316720-16318719 Arabidopsis thaliana
AT5G40770 2.0kb downstream 2.0kb downstream 3870 true Chr5: 16312850-16316719 Arabidopsis thaliana
AT5G40770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16312850-16314849 Arabidopsis thaliana
AT5G40770 5.0kb upstream 5.0kb upstream 6870 true Chr5: 16314850-16321719 Arabidopsis thaliana
AT5G40770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16316720-16321719 Arabidopsis thaliana
AT5G40770 5.0kb downstream 5.0kb downstream 6870 true Chr5: 16309850-16316719 Arabidopsis thaliana
AT5G40770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16309850-16314849 Arabidopsis thaliana
AT5G40770 10.0kb upstream 10.0kb upstream 11870 true Chr5: 16314850-16326719 Arabidopsis thaliana
AT5G40770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16316720-16326719 Arabidopsis thaliana
AT5G40770 10.0kb downstream 10.0kb downstream 11870 true Chr5: 16304850-16316719 Arabidopsis thaliana
AT5G40770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16304850-16314849 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374485 5261 Brassicaceae View MSA
123835592 5264 Brassicales-Malvales View MSA
124342851 5266 SBM View MSA
124241063 5268 Malvidae View MSA
124063622 5270 Rosid View MSA
123737783 5271 Pentapetalae View MSA
122796459 5272 Eudicot View MSA
122046711 5273 Angiosperm View MSA
121346125 5274 Embryophyte View MSA
123427118 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.035     High  
cufflinks 48.126     High  
cufflinks 39.925     High  
cufflinks 50.343     High  
cufflinks 36.113     High Low
cufflinks 53.451     High High

0 Strain