Gene : CRA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G44120 Defline:  (1 of 3) PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED
Genomic Order:  3768 Name:  ? AT5G44120
Secondary Identifier:  ? PAC:19667672
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44120 0.5kb upstream 0.5kb upstream 2525 true Chr5: 17756264-17758788 Arabidopsis thaliana
AT5G44120 0.5kb upstream 0.5kb upstream 500 false Chr5: 17758289-17758788 Arabidopsis thaliana
AT5G44120 0.5kb downstream 0.5kb downstream 2525 true Chr5: 17755764-17758288 Arabidopsis thaliana
AT5G44120 0.5kb downstream 0.5kb downstream 500 false Chr5: 17755764-17756263 Arabidopsis thaliana
AT5G44120 1.0kb upstream 1.0kb upstream 3025 true Chr5: 17756264-17759288 Arabidopsis thaliana
AT5G44120 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17758289-17759288 Arabidopsis thaliana
AT5G44120 1.0kb downstream 1.0kb downstream 3025 true Chr5: 17755264-17758288 Arabidopsis thaliana
AT5G44120 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17755264-17756263 Arabidopsis thaliana
AT5G44120 2.0kb upstream 2.0kb upstream 4025 true Chr5: 17756264-17760288 Arabidopsis thaliana
AT5G44120 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17758289-17760288 Arabidopsis thaliana
AT5G44120 2.0kb downstream 2.0kb downstream 4025 true Chr5: 17754264-17758288 Arabidopsis thaliana
AT5G44120 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17754264-17756263 Arabidopsis thaliana
AT5G44120 5.0kb upstream 5.0kb upstream 7025 true Chr5: 17756264-17763288 Arabidopsis thaliana
AT5G44120 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17758289-17763288 Arabidopsis thaliana
AT5G44120 5.0kb downstream 5.0kb downstream 7025 true Chr5: 17751264-17758288 Arabidopsis thaliana
AT5G44120 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17751264-17756263 Arabidopsis thaliana
AT5G44120 10.0kb upstream 10.0kb upstream 12025 true Chr5: 17756264-17768288 Arabidopsis thaliana
AT5G44120 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17758289-17768288 Arabidopsis thaliana
AT5G44120 10.0kb downstream 10.0kb downstream 12025 true Chr5: 17746264-17758288 Arabidopsis thaliana
AT5G44120 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17746264-17756263 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368782 5261 Brassicaceae View MSA
123839943 5264 Brassicales-Malvales View MSA
124350011 5266 SBM View MSA
124254285 5268 Malvidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 0.005     Low Low
cufflinks 0.021     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain