Gene : AT5G44000 A. thaliana TAIR10
Defline:  (1 of 3) K07393 - putative glutathione S-transferase (ECM4) Genomic Order:  3754
Name:  ? AT5G44000 Secondary Identifier:  ? PAC:19666250
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44000 0.5kb upstream 0.5kb upstream 2374 true Chr5: 17702090-17704463 Arabidopsis thaliana
AT5G44000 0.5kb upstream 0.5kb upstream 500 false Chr5: 17703964-17704463 Arabidopsis thaliana
AT5G44000 0.5kb downstream 0.5kb downstream 2374 true Chr5: 17701590-17703963 Arabidopsis thaliana
AT5G44000 0.5kb downstream 0.5kb downstream 500 false Chr5: 17701590-17702089 Arabidopsis thaliana
AT5G44000 1.0kb upstream 1.0kb upstream 2874 true Chr5: 17702090-17704963 Arabidopsis thaliana
AT5G44000 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17703964-17704963 Arabidopsis thaliana
AT5G44000 1.0kb downstream 1.0kb downstream 2874 true Chr5: 17701090-17703963 Arabidopsis thaliana
AT5G44000 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17701090-17702089 Arabidopsis thaliana
AT5G44000 2.0kb upstream 2.0kb upstream 3874 true Chr5: 17702090-17705963 Arabidopsis thaliana
AT5G44000 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17703964-17705963 Arabidopsis thaliana
AT5G44000 2.0kb downstream 2.0kb downstream 3874 true Chr5: 17700090-17703963 Arabidopsis thaliana
AT5G44000 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17700090-17702089 Arabidopsis thaliana
AT5G44000 5.0kb upstream 5.0kb upstream 6874 true Chr5: 17702090-17708963 Arabidopsis thaliana
AT5G44000 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17703964-17708963 Arabidopsis thaliana
AT5G44000 5.0kb downstream 5.0kb downstream 6874 true Chr5: 17697090-17703963 Arabidopsis thaliana
AT5G44000 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17697090-17702089 Arabidopsis thaliana
AT5G44000 10.0kb upstream 10.0kb upstream 11874 true Chr5: 17702090-17713963 Arabidopsis thaliana
AT5G44000 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17703964-17713963 Arabidopsis thaliana
AT5G44000 10.0kb downstream 10.0kb downstream 11874 true Chr5: 17692090-17703963 Arabidopsis thaliana
AT5G44000 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17692090-17702089 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360400 5261 Brassicaceae View MSA
123828611 5264 Brassicales-Malvales View MSA
124341276 5266 SBM View MSA
124238661 5268 Malvidae View MSA
124067514 5270 Rosid View MSA
123738506 5271 Pentapetalae View MSA
122790115 5272 Eudicot View MSA
122044364 5273 Angiosperm View MSA
121346730 5274 Embryophyte View MSA
123424261 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.03        
cufflinks 3.95        
cufflinks 24.647       High
cufflinks 5.208        
cufflinks 26.024     High High
cufflinks 3.478       Low

0 Strain