Gene : PDLP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G43980 Defline:  (1 of 1) PTHR32080:SF9 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 56
Genomic Order:  3752 Name:  ? AT5G43980
Secondary Identifier:  ? PAC:19670720
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43980 0.5kb upstream 0.5kb upstream 2443 true Chr5: 17694680-17697122 Arabidopsis thaliana
AT5G43980 0.5kb upstream 0.5kb upstream 500 false Chr5: 17696623-17697122 Arabidopsis thaliana
AT5G43980 0.5kb downstream 0.5kb downstream 2443 true Chr5: 17694180-17696622 Arabidopsis thaliana
AT5G43980 0.5kb downstream 0.5kb downstream 500 false Chr5: 17694180-17694679 Arabidopsis thaliana
AT5G43980 1.0kb upstream 1.0kb upstream 2943 true Chr5: 17694680-17697622 Arabidopsis thaliana
AT5G43980 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17696623-17697622 Arabidopsis thaliana
AT5G43980 1.0kb downstream 1.0kb downstream 2943 true Chr5: 17693680-17696622 Arabidopsis thaliana
AT5G43980 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17693680-17694679 Arabidopsis thaliana
AT5G43980 2.0kb upstream 2.0kb upstream 3943 true Chr5: 17694680-17698622 Arabidopsis thaliana
AT5G43980 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17696623-17698622 Arabidopsis thaliana
AT5G43980 2.0kb downstream 2.0kb downstream 3943 true Chr5: 17692680-17696622 Arabidopsis thaliana
AT5G43980 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17692680-17694679 Arabidopsis thaliana
AT5G43980 5.0kb upstream 5.0kb upstream 6943 true Chr5: 17694680-17701622 Arabidopsis thaliana
AT5G43980 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17696623-17701622 Arabidopsis thaliana
AT5G43980 5.0kb downstream 5.0kb downstream 6943 true Chr5: 17689680-17696622 Arabidopsis thaliana
AT5G43980 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17689680-17694679 Arabidopsis thaliana
AT5G43980 10.0kb upstream 10.0kb upstream 11943 true Chr5: 17694680-17706622 Arabidopsis thaliana
AT5G43980 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17696623-17706622 Arabidopsis thaliana
AT5G43980 10.0kb downstream 10.0kb downstream 11943 true Chr5: 17684680-17696622 Arabidopsis thaliana
AT5G43980 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17684680-17694679 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780030 5273 Angiosperm View MSA
122364622 5261 Brassicaceae View MSA
123836216 5264 Brassicales-Malvales View MSA
124348691 5266 SBM View MSA
124237507 5268 Malvidae View MSA
124071723 5270 Rosid View MSA
123744807 5271 Pentapetalae View MSA
122771253 5272 Eudicot View MSA
121051664 5274 Embryophyte View MSA
123091745 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.001       Low
cufflinks 3.318        
cufflinks 1.724        
cufflinks 4.187        
cufflinks 3.104        
cufflinks 3.268        

0 Strain