Gene : APS4 A. thaliana TAIR10
Primary Identifier:  ? AT5G43780 Defline:  (1 of 4) 2.7.7.4 - Sulfate adenylyltransferase / Sulfurylase
Genomic Order:  3731 Name:  ? AT5G43780
Secondary Identifier:  ? PAC:19669881
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5340 Arabidopsis thaliana pathologic  
Athaliana PWY-6932 Arabidopsis thaliana pathologic  
Athaliana SULFMETII-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43780 0.5kb upstream 0.5kb upstream 2642 true Chr5: 17589394-17592035 Arabidopsis thaliana
AT5G43780 0.5kb upstream 0.5kb upstream 500 false Chr5: 17591536-17592035 Arabidopsis thaliana
AT5G43780 0.5kb downstream 0.5kb downstream 2642 true Chr5: 17588894-17591535 Arabidopsis thaliana
AT5G43780 0.5kb downstream 0.5kb downstream 500 false Chr5: 17588894-17589393 Arabidopsis thaliana
AT5G43780 1.0kb upstream 1.0kb upstream 3142 true Chr5: 17589394-17592535 Arabidopsis thaliana
AT5G43780 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17591536-17592535 Arabidopsis thaliana
AT5G43780 1.0kb downstream 1.0kb downstream 3142 true Chr5: 17588394-17591535 Arabidopsis thaliana
AT5G43780 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17588394-17589393 Arabidopsis thaliana
AT5G43780 2.0kb upstream 2.0kb upstream 4142 true Chr5: 17589394-17593535 Arabidopsis thaliana
AT5G43780 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17591536-17593535 Arabidopsis thaliana
AT5G43780 2.0kb downstream 2.0kb downstream 4142 true Chr5: 17587394-17591535 Arabidopsis thaliana
AT5G43780 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17587394-17589393 Arabidopsis thaliana
AT5G43780 5.0kb upstream 5.0kb upstream 7142 true Chr5: 17589394-17596535 Arabidopsis thaliana
AT5G43780 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17591536-17596535 Arabidopsis thaliana
AT5G43780 5.0kb downstream 5.0kb downstream 7142 true Chr5: 17584394-17591535 Arabidopsis thaliana
AT5G43780 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17584394-17589393 Arabidopsis thaliana
AT5G43780 10.0kb upstream 10.0kb upstream 12142 true Chr5: 17589394-17601535 Arabidopsis thaliana
AT5G43780 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17591536-17601535 Arabidopsis thaliana
AT5G43780 10.0kb downstream 10.0kb downstream 12142 true Chr5: 17579394-17591535 Arabidopsis thaliana
AT5G43780 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17579394-17589393 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375356 5261 Brassicaceae View MSA
123800936 5264 Brassicales-Malvales View MSA
124298291 5266 SBM View MSA
124149966 5268 Malvidae View MSA
123875672 5270 Rosid View MSA
123459457 5271 Pentapetalae View MSA
122494848 5272 Eudicot View MSA
122043781 5273 Angiosperm View MSA
121349339 5274 Embryophyte View MSA
123426585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.227     High Low
cufflinks 261.828     High High
cufflinks 47.818     High  
cufflinks 330.041     High High
cufflinks 68.938     High  
cufflinks 128.092     High  

0 Strain