Gene : BHLH92 A. thaliana TAIR10
Primary Identifier:  ? AT5G43650 Defline:  (1 of 1) PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92
Genomic Order:  3715 Name:  ? AT5G43650
Secondary Identifier:  ? PAC:19672625
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43650 0.5kb upstream 0.5kb upstream 2104 true Chr5: 17533193-17535296 Arabidopsis thaliana
AT5G43650 0.5kb upstream 0.5kb upstream 500 false Chr5: 17534797-17535296 Arabidopsis thaliana
AT5G43650 0.5kb downstream 0.5kb downstream 2104 true Chr5: 17532693-17534796 Arabidopsis thaliana
AT5G43650 0.5kb downstream 0.5kb downstream 500 false Chr5: 17532693-17533192 Arabidopsis thaliana
AT5G43650 1.0kb upstream 1.0kb upstream 2604 true Chr5: 17533193-17535796 Arabidopsis thaliana
AT5G43650 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17534797-17535796 Arabidopsis thaliana
AT5G43650 1.0kb downstream 1.0kb downstream 2604 true Chr5: 17532193-17534796 Arabidopsis thaliana
AT5G43650 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17532193-17533192 Arabidopsis thaliana
AT5G43650 2.0kb upstream 2.0kb upstream 3604 true Chr5: 17533193-17536796 Arabidopsis thaliana
AT5G43650 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17534797-17536796 Arabidopsis thaliana
AT5G43650 2.0kb downstream 2.0kb downstream 3604 true Chr5: 17531193-17534796 Arabidopsis thaliana
AT5G43650 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17531193-17533192 Arabidopsis thaliana
AT5G43650 5.0kb upstream 5.0kb upstream 6604 true Chr5: 17533193-17539796 Arabidopsis thaliana
AT5G43650 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17534797-17539796 Arabidopsis thaliana
AT5G43650 5.0kb downstream 5.0kb downstream 6604 true Chr5: 17528193-17534796 Arabidopsis thaliana
AT5G43650 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17528193-17533192 Arabidopsis thaliana
AT5G43650 10.0kb upstream 10.0kb upstream 11604 true Chr5: 17533193-17544796 Arabidopsis thaliana
AT5G43650 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17534797-17544796 Arabidopsis thaliana
AT5G43650 10.0kb downstream 10.0kb downstream 11604 true Chr5: 17523193-17534796 Arabidopsis thaliana
AT5G43650 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17523193-17533192 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368637 5261 Brassicaceae View MSA
123829742 5264 Brassicales-Malvales View MSA
124337941 5266 SBM View MSA
124254088 5268 Malvidae View MSA
124064245 5270 Rosid View MSA
123737328 5271 Pentapetalae View MSA
122793301 5272 Eudicot View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.581        
cufflinks 17.799       High
cufflinks 1.604        
cufflinks 11.252        
cufflinks 0.597       Low
cufflinks 14.29        

0 Strain